Gene Shew_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1743 
Symbol 
ID4923974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1992935 
End bp1993438 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID640163305 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001093869 
Protein GI127512672 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTACCC TAGAAACAGA GCGTCTCGTC TTACGTGAAA TGACAGTAAA AGACGCCCCC 
TTTATGCTGA CCCTGCTCAA CAGTCAGGGC TTTGTCGATA ACATAGGCGA TCGCGGCGTG
CGCACCCTAG CGCAGGCTGA AAATCATCTC ATCGAGGGGC CGATTAACAG CTATCAGGAA
CATGGCTATG GCATGTACTG CATCGAACTC AGGCAAAGTG GCGAGCCAGT GGGCGTGGCC
GGTCTGGTCA ATCGCGAGCA GCTGCCCGGT ATCGACCTTG GCTATGCACT GTTGCCGGAA
TTTTTAGGTA AAGGCTATGC GGTTGAGGCC AGCCGCGCCG TGCTTGCCCA TGCTAAGGCG
CTCAGGCTCA GCAGCCTGCT GGCCATAGTG AAAGAACGCA ATGGCCCCTC GCGGGCACTG
CTTGAGAAGC TCGGCTTCGA GTGTCAGGAG CTTATCGCCT GGGGCGAGGG CGACGAAGTA
TTACTTTACA AGATAACACT TTAA
 
Protein sequence
MLTLETERLV LREMTVKDAP FMLTLLNSQG FVDNIGDRGV RTLAQAENHL IEGPINSYQE 
HGYGMYCIEL RQSGEPVGVA GLVNREQLPG IDLGYALLPE FLGKGYAVEA SRAVLAHAKA
LRLSSLLAIV KERNGPSRAL LEKLGFECQE LIAWGEGDEV LLYKITL