| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1741 |
|---|
| Symbol | |
|---|
| ID | 4923968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1991469 |
|---|
| End bp | 1992200 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640163303 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001093867 |
|---|
| Protein GI | 127512670 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTG AGCTGATCAT CGAAACCCCT ACCCACAAAT GGCTCTACTT CGGTCGCGAC
CCCGAAAAAC CCGATAAGAT CATCGACACC AACCAATACA TGGTGGTGAG TAGCCATCAC
GCCCTGTTGA TGGATCCCGG TGGCATTGAG CTGTTTGCGG CCATGCTGGC CAACATAGTC
AAGCATATCC CTCTCAGCCA GCTGACCCAT CTGTTTGCCT CTCATCAGGA TCCGGACATC
ATCTCCTCCC TCGGCTTGTG GGATCAGACC CTGCCCAAGG CCAAGCTCTA CTCACCCTGG
CTATGGGAGG GGTTCATCCG CCACTTCGGC ATGAATAACA TCAGCTACGA GCCCATCGCC
GACAACGGTG GCAGCGTGAG CCTAGATCAA GTTGAGCTGC AGTTTATTCC CGCTCACTAC
CTGCATGCCT CGGGTAACTT TCATGTTTAC GACCCAGTGA CTAAGGTCTT AATGAGCGGC
GATATCGGCG CGGCGCTGGA AGATCCCCAG GCCGATATTT ATGTGGACGA TTTCGAGCAA
CACTGCGCCA AGATGGCCTA CTTTCATCAG AGGTGGATGC CATCAAACCG TGCCAAGAAT
GACTGGATAA AGCGGGTGCG TAAGCTGGAT ATTCAATACC TCTGCCCTCA GCACGGCAGG
ATCTTCCGCG GCCCTCAGGT AAAGCAGTTC CTCGACTGGT TCGAGAATCT GAATGTGGGT
GTTGGGGTAT AG
|
|---|
| Protein sequence | MKSELIIETP THKWLYFGRD PEKPDKIIDT NQYMVVSSHH ALLMDPGGIE LFAAMLANIV
KHIPLSQLTH LFASHQDPDI ISSLGLWDQT LPKAKLYSPW LWEGFIRHFG MNNISYEPIA
DNGGSVSLDQ VELQFIPAHY LHASGNFHVY DPVTKVLMSG DIGAALEDPQ ADIYVDDFEQ
HCAKMAYFHQ RWMPSNRAKN DWIKRVRKLD IQYLCPQHGR IFRGPQVKQF LDWFENLNVG
VGV
|
|---|
| |