| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1721 |
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| Symbol | |
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| ID | 4922998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1975224 |
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| End bp | 1976153 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163283 |
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| Product | methyltransferase type 11 |
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| Protein accession | YP_001093847 |
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| Protein GI | 127512650 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0157757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA AGATGCCAAG CCTAACGCCC AGTTCATTGT CAAGCCTAAT ACCCAGTTCA
GTGCCAAGTG AAGTGCAGAA TGTGCAGGGT AAAGACTGTA TGAAAGAGGC GATTGGTGCA
GATAAGATAG CGCGGCAGTT CTCCCAGGCG GCTAAGCACT ATCAGGAGCA TGACAAGGTG
CAGCGTCTCA GCGCGCAGAG GCTGAGGACC AAGATGACGC CCATCGGACG TTTGTTAGAT
ATCGGTTGTG GTCCAGGTAC AGATTTTTCC GCGGCGCCAG GTCTTAATGA GGTGCTGGGG
CTGGATATCG CCCCCGGCAT GCTATCGCAG ATGCTCGAAA GTTTTCCTAG CTACAAGGCG
CTGTGCGGCG ATGCCCAGGC GTTGCCCCTA TCAGATGCCA GCATAGACAC CCTCTACTCA
AACCTAGCGC TGCAGTGGTG CAGCGATATC AAGACGGCCA TAGGTGAGCT TGCCAGGGTG
CTTAAGCCCG GCAGTCAATG CCATCTCGCC ATCGTCGTCG ATGGTAGCCT TTCTGAGCTC
GACGCGCTCG GGCTAAGGGT TAATGCCTTC GAGCAAGCCC AGACGCTGCT TGATGGGTTC
AGTGATAGCC ATTGGCAAAT TGAACACCAT TCGGTGGAGC CGCTGCGGGT GCATTTCGAC
GATCTTAAGA CGCTGCTCTA TTCCATCAAG GGGGTTGGCG CCTCTGCCGC TATGGGAAGC
GATGTCTCTC AAGGCTCAGA TGTCACTCAG GACTCAGATG CCTCCCACGG CCCAGATGAT
ACCCAGGGCT CAGTGAGTAA GCCGCCACCT AGGCTTCGTG GGCGTCAGGA TTGGTTGGCC
CTCTGTGAGC GCGCCGAAAA AATGCGTCAG CCAGAGGGAC TTCCCTTGAC CTATCAAATC
TTATTTATTC ATGCGAGCCG CAGAGGCTAG
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| Protein sequence | MSIKMPSLTP SSLSSLIPSS VPSEVQNVQG KDCMKEAIGA DKIARQFSQA AKHYQEHDKV
QRLSAQRLRT KMTPIGRLLD IGCGPGTDFS AAPGLNEVLG LDIAPGMLSQ MLESFPSYKA
LCGDAQALPL SDASIDTLYS NLALQWCSDI KTAIGELARV LKPGSQCHLA IVVDGSLSEL
DALGLRVNAF EQAQTLLDGF SDSHWQIEHH SVEPLRVHFD DLKTLLYSIK GVGASAAMGS
DVSQGSDVTQ DSDASHGPDD TQGSVSKPPP RLRGRQDWLA LCERAEKMRQ PEGLPLTYQI
LFIHASRRG
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