| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1718 |
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| Symbol | |
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| ID | 4922564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1971424 |
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| End bp | 1972764 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163280 |
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| Product | adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| Protein accession | YP_001093844 |
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| Protein GI | 127512647 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.592829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGA CGACCCAGAT CGACCACCAA TTCGACCGAC AACATATCTG GCACCCCTAC
ACCTCCATGA CCCAGGCTCT TCCTGTCTAT GGAGTGGTGT CGGCAGAGGG GTGCGAGTTG
ATCCTGGATG ATGGCAGACG CCTAATCGAT GGCACCAGCT CCTGGTGGGC CTGTGTGCAC
GGATACGGCC ACCCCTATAT CCTGGAGGCG ATGCAAAAAC AGCTCTCGAC CCTCAGCCAT
GTGATGTTTG GCGGCATCAC CCACCCTAGC GCCATCGCGG TGAGCAAGAA GCTACTTGCC
ATGACCAGCG ATAATCTTAC CAAGGTGTTT CTGGCCGATT CGGGCTCGAT TGCCGTCGAG
GTGGCGATGA AGATGGCACT GCAATATTGG CAGGGACGCG GCGCGCCAAG CAAGCAGCGG
ATACTCACGG TGAAGCATGG CTATCATGGC GACACGTTTG CGGCGATGAG CGTGTGTGAC
CCAGAAGGCG GCATGCATAC CATGTTTGGC GAGGCGGTGA CTCAGCAGCT GTTTGCCCCT
GCCCCCAAGA CCCCCTTCGG CGAAACCCTG ATCGCAGACG ATCTCGAGGC GATGGAGGCG
CTGCTGAACG CCCATCACCA GACCATAGCG GCGGTTATCA TAGAGCCCAT CATGCAGGGC
GCAGGTGCCA TGCATTTCTA CAGCGCCGAC TATCTGAAAG GGCTACGTGC GCTGTGCGAT
CGCTACAAGG TGTTGTTGAT CTTAGATGAG ATAGCCACAG GCTTTGGCCG CACCGGTAAG
CTGTTTGCCT ACCAGCATGC AGGTATTGAG GCGGATATTC TCTGCTTGGG TAAGGCGCTC
ACCGGCGGTT ATATCTCGCT GGCTGCCACC CTGTGTAGCG ACGAGGTGGC CTTAGGGATC
AGCGACTCCC CCTCTGGCGT CTTTATGCAT GGCCCCACCT TTATGGGTAA CCCGCTGGCC
TGCGCCGCCG CCAGTGCCAG TCTGGATCTG ATCAATCAAC ACCAGTGGCC CGAGCAGGTA
GCCGCCATCG AGCAGCAGAT GAAGCAGGAG TTAGCGACGG CCAGCGCAAT CGAGGGAGTA
AAAGCGGTGC GTTGTTTGGG CGCCGTTGGC GTGATTGAGA TGACCCGCAG CGTCAATACC
GCAGCATTGC AACAGGCCTT TGTGGATCGC GGCGTCTGGG TGCGCCCATT TTCGAGCTAT
ATCTATATCA TGCCGCCTTA CACTATTAGC GCACAGCAGC TTAGCCGCCT AACCCAGGCG
ATGCTGGAGG TCGCCGCCAT CGCGGGGGCT GAGGCGAAAG CATCGAGAGG CGATGAGGCG
AGCTTTATCA GCCACGGGTA A
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| Protein sequence | MSATTQIDHQ FDRQHIWHPY TSMTQALPVY GVVSAEGCEL ILDDGRRLID GTSSWWACVH
GYGHPYILEA MQKQLSTLSH VMFGGITHPS AIAVSKKLLA MTSDNLTKVF LADSGSIAVE
VAMKMALQYW QGRGAPSKQR ILTVKHGYHG DTFAAMSVCD PEGGMHTMFG EAVTQQLFAP
APKTPFGETL IADDLEAMEA LLNAHHQTIA AVIIEPIMQG AGAMHFYSAD YLKGLRALCD
RYKVLLILDE IATGFGRTGK LFAYQHAGIE ADILCLGKAL TGGYISLAAT LCSDEVALGI
SDSPSGVFMH GPTFMGNPLA CAAASASLDL INQHQWPEQV AAIEQQMKQE LATASAIEGV
KAVRCLGAVG VIEMTRSVNT AALQQAFVDR GVWVRPFSSY IYIMPPYTIS AQQLSRLTQA
MLEVAAIAGA EAKASRGDEA SFISHG
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