| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1716 |
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| Symbol | |
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| ID | 4922364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1969686 |
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| End bp | 1970807 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163278 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_001093842 |
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| Protein GI | 127512645 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATCA CCAAGCATTC CAATCACACA GACAACGTAA ATCTGCTTCC TGAAGAGCTT
GAGGCGTTAA CTCAGCTGGC GGGTCTTAGC CGCCATGCCT TGGTAACCGG CGCCGGCGGC
TTTCTGGGTA AGGCGATTTG TCAGCGACTC ATAGCGGCGG GCATTGCCGT GACAGGCTTT
GCCCGGGGGC ATTATCCCGA GCTCGAAGCC ATGGGCGTTA ACATGGTGAG CGGCGATATC
TGCGATCTCG AGTCCGTAAC CAATGCCATG GCCGGCTGCG ACCTGGTGTT TCATGTGGCC
TCTAAGGCCG GAGTATGGGG CAGCAAGGAG AGCTATTTTG CCCCCAATGT GCAGGGCTGC
GACAACCTGC TTAAGGCAGC TGCCGCCCAT GATATAGACA GTTTCGTCTA TACCAGTACC
CCGAGCGTGA CCTTTGCCGG TGAAGATGAA TCTGGCATAG ACGAGCGCGC GCCCTATGCC
AGTCGTTTCC TTAACTATTA TGGCGAGTCC AAGGCGATCG CCGAGCAGAG AGTGACGGCC
GCAAACAGCA CCTCATTGTC GAGTGCCAAT TCTCCCTCTG AAGGCAAGCT AAATACCGTA
TCCCTTAGGC CCCATCTCAT CTGGGGGCCG GAAGATCCTC ATCTGGTGCC CAGGGTGATT
GCCCGCGCCC GAGCCGGTAA GCTCAAGTTA GTGGGTAAGG TCGATAAGCT GGTGGATACC
ATCTATGTCG GCAACGCGGC CTACGCCCAT ATTCTGGCGG CCCTGACCCT CAAGCAAAAC
CCGCAGCAGT GCGCCGGAAA GTGTTACTTT TTGAGTAACG ATGAGCCGAT CACCATGAAG
GTTATACTCA ACAAGATCTT GGCCTGTGCC GAGCTGCCCA AGGTCGAGAA GCGGGTACCC
GCCAGCGTCG CCTATCTGGC CGGCGCCCTG TTAGAAGGGG TCTATGGCCT GCTGGGCAAA
TGCGATGAGC CCATCATGAC ACGCTTCGTG GCCAGACAGC TCTCTACCTG TCACTATTTC
GATATCTCCG CGGCCAAGCG CGACCTCAAC TATCGCCCCT TGGTATCGAT CGATGAGGGG
ATGGTGCAGT TAAGCAACTG GCTGAAGCAG GAAAAAGTAT AA
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| Protein sequence | MSITKHSNHT DNVNLLPEEL EALTQLAGLS RHALVTGAGG FLGKAICQRL IAAGIAVTGF
ARGHYPELEA MGVNMVSGDI CDLESVTNAM AGCDLVFHVA SKAGVWGSKE SYFAPNVQGC
DNLLKAAAAH DIDSFVYTST PSVTFAGEDE SGIDERAPYA SRFLNYYGES KAIAEQRVTA
ANSTSLSSAN SPSEGKLNTV SLRPHLIWGP EDPHLVPRVI ARARAGKLKL VGKVDKLVDT
IYVGNAAYAH ILAALTLKQN PQQCAGKCYF LSNDEPITMK VILNKILACA ELPKVEKRVP
ASVAYLAGAL LEGVYGLLGK CDEPIMTRFV ARQLSTCHYF DISAAKRDLN YRPLVSIDEG
MVQLSNWLKQ EKV
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