Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1714 |
Symbol | |
ID | 4922223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1967062 |
End bp | 1967934 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163276 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001093840 |
Protein GI | 127512643 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT CGTTATTTCC TATTAAACGC AATTACTTAG ATCGTAATGG TCACAAGTTG CAATATGTGA ATGAAGGCCA GGGTGAGCCC GTGGTCATGG TGCATGGCAA CCCGAGCTGG TCTTTCTATT ATCGCAATCT GGTGACGGCG TTGAGCCCTA ATCATCAGTG CATAGTGCCG GATCATATCG GCTGCGGTCT GTCGGACAAG CCAGACGATG CCGGTTACGA CTATACCCTG AAGAATCGTA TCGACGATCT GGAAGCCTTG CTGGATCACC TCGAGGTGAA AGAGAAGATC ACCCTGATCG TTCACGACTG GGGCGGCATG ATAGGCATGG GTTATGCGGC CCGTCATCCC GAGCGGATCA AGAAAATCGT GGTGCTCAAC ACTGGCGCCT TTCATCTGCC AGAGGCCAAG CCGTTTCCTT GGGCGCTGTG GATCTGTCGT AACACCTTAC TGGGCACAGT ATTAGTGCGC GGCTTTAACG CTTTCTCCTC TATCGCCTCT TATGTAGGGG TGAAGCGCGC GCCTATGCCA AAGGCGATAC GCGAGGCCTA TGTGGCGCCC TTTAACTCTT GGGCGAATCG TATCTCGACC CTGCGCTTCG TGCAGGATAT TCCGCTCAAG CCTGGCGATC GCAACTATGA ACTGGTGAGT GAGATCAGTG AAAAGCTGAA CCAGTTTAAC CAACTGCCTA TGATGATCTG CTGGGGACTC AAAGACTTTG TATTCGACAA ACACTTCCTC GATGAGTGGA AGCGTCGATT CCCCGAGGCC GAGGTGCATG AGTTTGCCGA CTGTGGTCAC TATATCCTGG AAGATGCCAG CGATGAGGTG GTGGCCCAGG TGCAGCAATT TATGGCGCGT TAA
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Protein sequence | MLDSLFPIKR NYLDRNGHKL QYVNEGQGEP VVMVHGNPSW SFYYRNLVTA LSPNHQCIVP DHIGCGLSDK PDDAGYDYTL KNRIDDLEAL LDHLEVKEKI TLIVHDWGGM IGMGYAARHP ERIKKIVVLN TGAFHLPEAK PFPWALWICR NTLLGTVLVR GFNAFSSIAS YVGVKRAPMP KAIREAYVAP FNSWANRIST LRFVQDIPLK PGDRNYELVS EISEKLNQFN QLPMMICWGL KDFVFDKHFL DEWKRRFPEA EVHEFADCGH YILEDASDEV VAQVQQFMAR
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