Gene Shew_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1709 
Symbol 
ID4921932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1962233 
End bp1962598 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content48% 
IMG OID640163271 
Producthypothetical protein 
Protein accessionYP_001093835 
Protein GI127512638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC ATCAAGGTCA AAGTAAATTA GATAAAGTAT TGGCAGAGGC CCGCGAATAT 
AAAGCCAAGC GTGAGTCTGG CTATCGCGAA AAGGCGCTTA AACTTTATCC CTGGATCTGC
GGACGTTGTA CCCGCGAATT TACCCACTCC AATCTCAGGG AACTGACGGT CCATCACAGG
GATCATAATC ATGACAATAA CCCCAGCGAC GGTTCCAACT GGGAGCTACT CTGCCTCTAT
TGCCATGACA ACGAACATGC CAAGTATGAA GAGTTGATCC AGTACGGACC GACGAGTGAG
ACTCAGGTAG AAGCGGCGAC CTACAATCCC TTCGCCGATC TTAAGAATAT GATGAACAAG
AAGTAA
 
Protein sequence
MSTHQGQSKL DKVLAEAREY KAKRESGYRE KALKLYPWIC GRCTREFTHS NLRELTVHHR 
DHNHDNNPSD GSNWELLCLY CHDNEHAKYE ELIQYGPTSE TQVEAATYNP FADLKNMMNK
K