| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1686 |
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| Symbol | |
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| ID | 4920441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1938497 |
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| End bp | 1939174 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163248 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093812 |
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| Protein GI | 127512615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0468656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00125364 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATCTA GCTTGCTAAA ACTGAGCCAG AACTTGGGTC TTAATTTGGG CCTTAATTTG
GGCCTCAACT TGGGGCTAAA AATGGGCTTG AGCCTGTTGC TGTTAACCAG CGTGACCGCC
TGCAGCGTGA CTCAGGAGGA GCCTCTGCAA CTGTCGATGG CGCCCGAGGA TCGTCTGACC
CTGGTGGCCA GTGGTGATTT GAGCTTCATC CAGGGGCAAG CTAGCCAAGA CGGACAGGCG
TTTGCCCTGC ACCCAGATTT CGAGCTACTC AATGTGGGGC AAGAGGTGAA GCCGGAACAG
CTAAAATCGC GAATGCGCGG CGCCATCACC GCCGTGATGC AGGCCAAGGG CTATCGACAG
GTGCTGGCAT CGGATTCGCC AGATCTCTTG ATCGGCTATG GCGTGGCCCT CGGCGATACC
ATGAGCGATG GTGAGATCCT GCAGAAAGTC GGGCTAGTGC CGGGGGTCTC GGCCCAAGGG
GTGGACATGC GCCGCTTCGA GAAAGGCTCT GTGTTGCTTC TGGTGTTCGA CCCTAGGTTG
ATGGAGCCTA GCTGGCGGGT GTTAGCCCAG GGATTTACCC CGTTAAATCA AGACAGCACC
CTGGCGGCGC AGCAGGCCGA CGAGAGGCTT ACTCGGGTGA TCAATAAGAT GCTCAGCGAG
TTGCCGCAAA CCCCTTAA
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| Protein sequence | MKSSLLKLSQ NLGLNLGLNL GLNLGLKMGL SLLLLTSVTA CSVTQEEPLQ LSMAPEDRLT
LVASGDLSFI QGQASQDGQA FALHPDFELL NVGQEVKPEQ LKSRMRGAIT AVMQAKGYRQ
VLASDSPDLL IGYGVALGDT MSDGEILQKV GLVPGVSAQG VDMRRFEKGS VLLLVFDPRL
MEPSWRVLAQ GFTPLNQDST LAAQQADERL TRVINKMLSE LPQTP
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