| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1682 |
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| Symbol | |
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| ID | 4920463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1932935 |
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| End bp | 1933699 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163244 |
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| Product | ribonuclease H |
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| Protein accession | YP_001093808 |
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| Protein GI | 127512611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.240069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000212508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAAGCA AATATTATGT GGTATGGGCA GGACGCGAAA CCGGCATCTT TACCAGTTGG
CCCCAGACCA AGGCACTGGT CGACGGCTTT GCCGGCGCGC GTTATAAGTC GTTTAAGACC
CAGGCAGAAG CCGAGGCCGC CTTTGGTGCT GGTAAAGGCC AATCCGCCGC AGGCAGCAAG
GGGACTAGCA GCAAGGCTAA ACCGGCGGCA TCCAAGCCAA GCAAGCCCGC CGTTAGTGAG
CAGCCAGACA GCGATATCGA TATCTATACC GATGGCGGCT GCGAGCCCAA TCCGGGTGAG
GCGGGTTCTG GCCTGGCGCT GTATAAAAAA GGCGAGTTAG CCGAACTCTG GTATGGACTC
TACAACCCCA AGGGCACCAA CAACACCGCC GAGTTAAACG CCCTGCATCA GGCGCTCTTG
ATGGCCAGGC AATACCTTGA GCAGGGGCTT AGGGTGCATA TTCATAGCGA CTCCCAATAT
GCCATCAAGT GTATCTCCCT GTGGGCCTAT GGCTGGAAGG CTAATGGCTG GCGCCGTAAG
ACGGGTGAGA TAGCGAACTT AAGCGTGATC CAAGAGGCCC ATGAGCTGTA CGATAGCCTG
AAGGATAAGC TCAAGCTCAG CCATGTGGCG GCCCACGTAG GGATTGAGGG CAACGAGCTG
GCCGATCGCA TGTCTATCTA CACCATAGAG AGCAAGGAAA CCCGCTTTAG CCGCTATCAG
CAGCCGTTGG ATGTTCCAGC CCTGTTGGCG ATGCGGGCGG GATAA
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| Protein sequence | MASKYYVVWA GRETGIFTSW PQTKALVDGF AGARYKSFKT QAEAEAAFGA GKGQSAAGSK
GTSSKAKPAA SKPSKPAVSE QPDSDIDIYT DGGCEPNPGE AGSGLALYKK GELAELWYGL
YNPKGTNNTA ELNALHQALL MARQYLEQGL RVHIHSDSQY AIKCISLWAY GWKANGWRRK
TGEIANLSVI QEAHELYDSL KDKLKLSHVA AHVGIEGNEL ADRMSIYTIE SKETRFSRYQ
QPLDVPALLA MRAG
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