| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1678 |
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| Symbol | |
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| ID | 4920482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1929538 |
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| End bp | 1929966 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163240 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093804 |
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| Protein GI | 127512607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000212508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAAATTT ATCGTAAATT ACATAAGGCC CCCTTCAGGG TGCTGCGCAT CAGTCGACGC
CGCTTCGGTC TACGTTTAAA ACGTGACATG TTGGTGCTCA AAGATGCCCT GGCCCAGGAG
AAACAGGAGA CCAAGGATAT GCTGGTCGCC TATGGTCGTT ACACCCGCAA GCAGGCCAGC
AAGGAAGAGC TACGGCTGGC CAACCAGCAG CTGGCGGATC TGATCAAAGG CCTGGGCCTT
GGGGTGTTTG CCGTGCTGCC CTTTGCCCCC ATCACCATTC CTGTGGTAGT GAAACTGGGT
AAGTTGGTCG GCGTCGAGGT GCTGCCCAGC TCCTTCAATA ATCTCTCCGA ACGCAAGGCC
CAGCTGAGCC GTGAAGCCCG TGCCAATAAG CGCGCCCTGG ACGCTGTCGA AAAAGCCAGC
AATGAATGA
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| Protein sequence | MKIYRKLHKA PFRVLRISRR RFGLRLKRDM LVLKDALAQE KQETKDMLVA YGRYTRKQAS
KEELRLANQQ LADLIKGLGL GVFAVLPFAP ITIPVVVKLG KLVGVEVLPS SFNNLSERKA
QLSREARANK RALDAVEKAS NE
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