| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1675 |
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| Symbol | |
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| ID | 4920507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1924089 |
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| End bp | 1926140 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163237 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001093801 |
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| Protein GI | 127512604 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.270345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000408122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCGAC GGTTCAAAAA CCTGACTCTG GTGCTGATCA TGGTGGCCGT GGCCGCCGTA
CTCTCGATGC GCCTTTTTCA GGTCGAGCCT CCCGAACAGC CCCGCGACAA GCGTAGTGGT
CGTCTGATCG CCGACTACGG CAGCTGGCAC TCGGTGCTCT CCGCCAAGCA GGTCTACGCC
CCCTCGGACA GCTTCGGCGT CCTCAGGCCC ATGGAGGGCG GACTCTATTT CACCCAGGCC
GACGCAGAAC GCGGCGGCAA GGTGGGGGTC AATAAGCTCA CACCAAAGGG TGAGGTGGCG
AGCATCATAG CTCCCGAATT CGATGTGAAG AGCCGGGTAC ACGAGTATGG CGGCGCCCCC
GTGCTGGCCA TAGGTAACAG CCTGTTTGCG GTGAAAAGTG ACGATCAGCG CCTCTACCGT
ATCGCCCCCA ATCAGGCGCC CGTGGCCCTA ACGCCAGCAG ATACGCGCCA CGCCGACTGT
GTCTCTTACC CTAAAGGTTC GCGCATCATC TGTGTGCGCG AAGATCACCG CCAGGCAGGG
GATCCCACCG CCAGCATAGT GGCGTTAAAC CTTAATTTTG AAAATGAAGG CGAGCCCCTG
GTCAGCGGTA GTGATTTTTA CGCCGCGCCC CGTGTCTCAC CGGATAATCG CCAGCTGGCC
TGGATAAGCT GGCAGCAACC TAATATGCCC TGGGACAACA CTGAGCTTTG GGTGGCCGAT
CTTGACCCCA AGGGCGGCAT CAACAATCCA AGACGCCTGT TTGCCAATCT TAAAGGCGCC
ATCACTCAAC CCCTCTACAG CCCCGGCGGT GAGCTCTATG TGGTGGCCGA TTTCAACAAT
TGGTGGAACC TCTATCGCAT CACGCCAGAG GGCGATGCTC AGCCTGTGCT CGAATTGGCG
GGGGAGTTTG CCCGGCCCGA CTGGTTGCTG GGCAACCACA GCTATGCCTT CGAGTCTGAG
GAGCAACTGA TCGCCAGCGT GCAGACTGAG GGCAGGACAT ACCTGCTTAG GCTGCATACC
CAGCTTGGGA TCAGTGAGTC GATTGCCGCC GAGTTTGCGG AGGTTACACA GGTGGTTAAG
GGGCCGGACG GCGTCTATTT CATCGGCAGT AAGGTAACGC CGGAGAAGGG GATCTACCGC
ATTCGGGGTC GGGGCGTCGA GTGGGTATAT GGGCCTAGGG TGACGCCCCT CGACCCTCGC
TACATCTCAC GTGCCGAGTA CATCCAGTTT ATCTCGGACA TCAGTGGGCT GCCCGTCTAT
GGCTACTTCT ACGGCCCCAT GAACCCAGAT TATATCGCGC CGGACGACCA ACGCCCGCCG
CTTATCGTCA TGTTGCATGG CGGGCCCACC TGGCGGGCCA GCCTGAGTTT TCGCCGGGAT
ATCCAGTTCT GGACCAGTCG CGGCTTTGCC GTGCTGGATG TCAATTACCG TGGTAGCTCA
GGCTTTGGCC GTGACTATCG TCAGAGTCTC TATGGTTTGT GGGGTAGGGC CGAGGTGGAA
GATGCCATCG AGGCGGCCGA TTATGTGATG GACAAGGGCT GGGTCGACGC CGACAAGGTG
GCCATTCGCG GCATGAGCGC CGGCGGCTTC AGCGTGCTCT CGGCGATGGC CTTCTATCAC
ACCTTCAAGG CCGGTGTGGT CTACTCGGGG ATCAGCGATC TCGAGGCCCT TGATCGGGAG
ACCCATAGAT TCGAACAGGG CTATCTGCAT CATCTGGTGG GGGAGCTTAA ACCTAACTCG
CCCCTCTATC GTCAGCGCTC GCCTCTATAT CACTTAGACG ATCTCAAGGC GCCGCTGCTG
CTGGTGCAGG GGGCCAAGGA TCCTATCGTG CCCGCTAGGC AGTCAGAGGC CATCTACGCC
GCGCTGAAAC GCCGGGGCGT ACCCGTGGCC TACCTGCAAT TTGACGATGA GGGCCACGGG
GTGAAGAAGC CGTTGAATCG TATCGCCGCA CTCAACGCCG AATTATCCTT TTATGGTCAG
GTGTTTGGCT TTACGCCAGC CGATAAGCTG AGTCCACTTG CCATAGATAA CGCGCTCGCC
CTAGGCCACT AA
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| Protein sequence | MARRFKNLTL VLIMVAVAAV LSMRLFQVEP PEQPRDKRSG RLIADYGSWH SVLSAKQVYA
PSDSFGVLRP MEGGLYFTQA DAERGGKVGV NKLTPKGEVA SIIAPEFDVK SRVHEYGGAP
VLAIGNSLFA VKSDDQRLYR IAPNQAPVAL TPADTRHADC VSYPKGSRII CVREDHRQAG
DPTASIVALN LNFENEGEPL VSGSDFYAAP RVSPDNRQLA WISWQQPNMP WDNTELWVAD
LDPKGGINNP RRLFANLKGA ITQPLYSPGG ELYVVADFNN WWNLYRITPE GDAQPVLELA
GEFARPDWLL GNHSYAFESE EQLIASVQTE GRTYLLRLHT QLGISESIAA EFAEVTQVVK
GPDGVYFIGS KVTPEKGIYR IRGRGVEWVY GPRVTPLDPR YISRAEYIQF ISDISGLPVY
GYFYGPMNPD YIAPDDQRPP LIVMLHGGPT WRASLSFRRD IQFWTSRGFA VLDVNYRGSS
GFGRDYRQSL YGLWGRAEVE DAIEAADYVM DKGWVDADKV AIRGMSAGGF SVLSAMAFYH
TFKAGVVYSG ISDLEALDRE THRFEQGYLH HLVGELKPNS PLYRQRSPLY HLDDLKAPLL
LVQGAKDPIV PARQSEAIYA ALKRRGVPVA YLQFDDEGHG VKKPLNRIAA LNAELSFYGQ
VFGFTPADKL SPLAIDNALA LGH
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