| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1668 |
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| Symbol | |
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| ID | 4920541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1917266 |
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| End bp | 1918771 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163230 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001093794 |
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| Protein GI | 127512597 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0813192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00645867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACTC AAGTAAAACA TTACATCGAC GGTCAGTTTA TTTTAGGTAG CGGCCAGCAA
CAGATCTCTG TCACCAACCC GGCAAACAAC GAGGTGATTG CCACCATCAA CGCCGCTACG
GTAGAAGAAG TTGAAACCGC CATCGCCAGC GCCAAGCAAG CCTTTGCTAC CTGGAAAGAG
GTGCCTGTGT CTGAGCGTGC GCGCGTCATG TTCCGTTACC AGCACCTGCT AAAGCTGCAT
CACGATGAGA TCGCCACCAT CCTGGCCCAG GAAACCGGTA AGACCTTCGA AGATGCCAAG
GGCGATGTAT GGCGCGGTAT AGAGGTGGCA GAGCATGCCT GTAATATCGC CAGCCTGATC
ATGGGCGAAA CCGTTGAAAA CGTGGCCCGC AGCATAGACA CCTATAGCTA CACTCAGCCC
CTGGGGGTGT GCGCCGGTAT TACGCCGTTT AACTTCCCGG CGATGATCCC ACTGTGGATG
TTCCCTCTGG CGATCGCCTG TGGTAACACC TTCGTACTGA AGCCATCAGA GCAAGATCCG
CTGACGCCAC AGCGTCTGGT TGAGCTGTTC GAAGAAGCCG GCGCGCCTAA AGGCGTACTG
CAGCTGGTAC ATGGCGACAA GACGGCGGTA GACGTGCTGC TCAGCCATCA GGATATCAAG
GCGATCTCTT TCGTCGGCTC TGTGGGCGTG GGTCAGTACA TCTATAAGAC AGGTACCGAT
AACCTCAAGC GCGTTCAGGC CTTTGCCGGT GCCAAGAACC ACTGTGTCAT CATGCCAGAT
GCCAACAAGC AGCAGGTGAT CAACAACCTG GTGGGCGCCT CTGTGGGCGC GGCCGGTCAG
CGCTGTATGG CCCTGTCGGT AGCGGTGTTT GTCGGCGAAG CCAAAAAGTG GATCCCTGAG
CTGCGTGACG CCATCGCCAA GGTTAGACCC GGCGTATGGG ACGATAAAGA TGCGGCCTAT
GGCCCAGTTA TCAGCCCGGC CGCCAAGGCG CGTGTGCTTA AGTTGATTGC CCAGGGTAAG
GAAGAGGGCG CCGAGTGTCT GCTGGACGGT AGCGATTTCA CCGTAGAAGG CTATGAAAAT
GGCAACTGGG TTGGCCCAAC CATGTTTACC AATGTGACCA CAGACATGAG CATCTACAAG
GAAGAGATCT TCGGCCCTGT ACTTTGCTGC ATGGAAGTAG AGTCGCTGGA AGAGGCGATC
GAGCTGGTGA ACAACAGCCC ATATGGTAAC GGCACCTCTA TCTTCACCGC TTGCGGCGCC
GCAGCTCGTA AGTATCAGCA CAATATCGAA GTGGGTCAGG TCGGGATCAA CGTGCCAATT
CCTGTGCCAC TGCCATTCTT CTCGTTTACC GGTTGGAAGG GCAGCTTCTA CGGCGATCAA
CACGCCTATG GTAAGCAGGC GGTGCGTTTC TACACAGAGA CCAAGACTAT TACCGCTCGC
TGGTTCGAGA CAGATATTGT CGAGGCGGAG CACCATGCGC CTAACATGAC CATTGCCCTG
AAATAA
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| Protein sequence | MTTQVKHYID GQFILGSGQQ QISVTNPANN EVIATINAAT VEEVETAIAS AKQAFATWKE
VPVSERARVM FRYQHLLKLH HDEIATILAQ ETGKTFEDAK GDVWRGIEVA EHACNIASLI
MGETVENVAR SIDTYSYTQP LGVCAGITPF NFPAMIPLWM FPLAIACGNT FVLKPSEQDP
LTPQRLVELF EEAGAPKGVL QLVHGDKTAV DVLLSHQDIK AISFVGSVGV GQYIYKTGTD
NLKRVQAFAG AKNHCVIMPD ANKQQVINNL VGASVGAAGQ RCMALSVAVF VGEAKKWIPE
LRDAIAKVRP GVWDDKDAAY GPVISPAAKA RVLKLIAQGK EEGAECLLDG SDFTVEGYEN
GNWVGPTMFT NVTTDMSIYK EEIFGPVLCC MEVESLEEAI ELVNNSPYGN GTSIFTACGA
AARKYQHNIE VGQVGINVPI PVPLPFFSFT GWKGSFYGDQ HAYGKQAVRF YTETKTITAR
WFETDIVEAE HHAPNMTIAL K
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