| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1667 |
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| Symbol | |
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| ID | 4920549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1915940 |
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| End bp | 1917130 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163229 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_001093793 |
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| Protein GI | 127512596 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00240927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0395085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG AGCAAACTAA CCAAGAAATC GTGATTGTCG CGGCTAAACG CACCCCAATG
GGCGGATTCC AGGGATCCCT TTCCAGCGTG CCGTCACCGA CACTCGCCGC CACGGCGATC
AAGGGACTCA TGGACGCTGC CGGCGTTCAG GGCGGCGATG TCAACGAAGT CTTGATGGGC
TGCGTATTAC CGGCGGGCCT GGGTCAGGCG CCGGCGCGTC AGGCAACCTT AGGTGCGGAT
CTTCCCCTGT CTGTGGGCGC GACTACAGTC AACAAGGTGT GTGGTTCGGG CATGAAGACA
GTCATGCTGG CTCACGACCT GATCAAGGCT GGTAGCGCCG ATGTCGTGAT CGCCGGTGGC
ATGGAGAGCA TGAGCCAGGC GCCTTACCTG CTGGATAAGG CTCGTGGCGG CATGCGCATG
GGTCATGGCA AGGTGCTGGA TCACATGTTC CTCGATGGTC TGGAAGATGC TTACACAGGC
GGCGCCATGG GCACCTTTGC CCAGAAGACG GCCGATGATT TTGGTATTAC CCGTGAGGCG
ATGGATAACT TCGCCCTGAG CTCGCTGCAA AAAGCTAACG CTGCGATCGA ATCTGGTGCC
TTCAAGGCAG AGATAGTGCC GGTTACCGTG GCGAGCCGTA AAGGCGATCT TGTTGTCGAT
ACCGACGAGC AGCCAGGTAA CGCAAGACCC GAGAAGATCC CAACTCTGCG TCCCGCTTTT
GCCAAAGATG GCACCATCAC AGCTGCCAAC TCAAGCTCTA TCTCAGATGG CGCTGCCGTG
TTGATGATGA TGAGTGCCGA TGAGGCGAGC AAGCGCGGTC TAGAAGTTCT GGCCACTATC
AAGGGCCATA CTACTCATTC ACAAGAGCCT TCTATGTTCA CCACGGCGCC AGTGGGTGCC
ATGAACAAGC TGCTGGATAA GGTGAACTGG TCGAAAGACG AGGTGGATCT GTTTGAGATC
AACGAAGCCT TCGCCATGGT CACCATGCTT GCCATCTCTG AACTTGGCCT GGATGAGGCT
AAGGTTAACG TCAATGGCGG CGCCTGTGCA CTTGGCCATC CTATCGGCTG CTCGGGTGCC
CGCGTGCTGG TCACCCTGAT CCACGCTCTG AAGGCCAGAG GCCTTAAGCG TGGCGTGGCA
TCACTTTGTA TCGGTGGTGG TGAAGCCACG GCCATGGCTA TCGAAGTGTA A
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| Protein sequence | MSTEQTNQEI VIVAAKRTPM GGFQGSLSSV PSPTLAATAI KGLMDAAGVQ GGDVNEVLMG
CVLPAGLGQA PARQATLGAD LPLSVGATTV NKVCGSGMKT VMLAHDLIKA GSADVVIAGG
MESMSQAPYL LDKARGGMRM GHGKVLDHMF LDGLEDAYTG GAMGTFAQKT ADDFGITREA
MDNFALSSLQ KANAAIESGA FKAEIVPVTV ASRKGDLVVD TDEQPGNARP EKIPTLRPAF
AKDGTITAAN SSSISDGAAV LMMMSADEAS KRGLEVLATI KGHTTHSQEP SMFTTAPVGA
MNKLLDKVNW SKDEVDLFEI NEAFAMVTML AISELGLDEA KVNVNGGACA LGHPIGCSGA
RVLVTLIHAL KARGLKRGVA SLCIGGGEAT AMAIEV
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