Gene Shew_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1664 
Symbol 
ID4923529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1913133 
End bp1913420 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content55% 
IMG OID640163226 
Producthypothetical protein 
Protein accessionYP_001093790 
Protein GI127512593 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0176885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0334132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCG TGATTTTTCG GGCCAAGGTG GCCACTTTAG ATGCCAGATA TGCCGAGATG 
GCCGCTAAGA TGCGGCAGTT GGCGATGGAT AAGTATCACT GCCAGGACTT CGTTGCCGTC
ACCGAAGGCG ATCAGGAGAT CGCCATCTCC TATTGGCGCA GCGAGGCCGA TATTCTGGCC
TGGAAACAAG ACAGCGAACA TAGAATCGCC CAGCAACTTG GCCGCGAGGC CTGGTATGAG
CGTTATAAGG TCGAGGTGGT GGAGATCAAG CGCCAGTATC AAGGCTAA
 
Protein sequence
MFAVIFRAKV ATLDARYAEM AAKMRQLAMD KYHCQDFVAV TEGDQEIAIS YWRSEADILA 
WKQDSEHRIA QQLGREAWYE RYKVEVVEIK RQYQG