Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1663 |
Symbol | |
ID | 4923419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1912571 |
End bp | 1913092 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640163225 |
Product | hypothetical protein |
Protein accession | YP_001093789 |
Protein GI | 127512592 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.039673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0367113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCATT TTGAGTGTGA CCTCGGTGAC CTCGGGGCAG AAGTGCTGAC ACAAGACGCT GCAACTGCGG CGGACAGTCT CAACAGCCAG CTAGCGATCA TCATGCGCGG CCTGCCAGGC AGTGGTAAGA GTCACTGGGT CGATAGCTTC ATTGCCGCTC GCCCCGACGG TGAGGCGATT CGCCGCCGCG GCTACTTCTC TACCGACGAT CGTTTCATCA TTGCAGGTGA GTACCGCTTC GATGCCAGTA AGCTGTCTGA ATATCATCAG CTTAACCTTA CCGGTTTCAT TCAGGCCTTG TCGCGCCGGG AGCCCGTAGT GATCTGCGAT AACACCAACA TGGCCCACTG GGAGTTTATG GCCTACGAGG CCGCCGCCAA GGCGATGGGC TATCAGGTGC GCATTTTGCT GATTGGCGAT CCCGAGGATG AGGCGCATCA GGCGCTGTGC GCCGAGCGTA ATCAGCACGG CCTGGGGCTC AGGCAGATCC AGGCGATGGC GCGTCAATTC CAGCAGCTGT GA
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Protein sequence | MSHFECDLGD LGAEVLTQDA ATAADSLNSQ LAIIMRGLPG SGKSHWVDSF IAARPDGEAI RRRGYFSTDD RFIIAGEYRF DASKLSEYHQ LNLTGFIQAL SRREPVVICD NTNMAHWEFM AYEAAAKAMG YQVRILLIGD PEDEAHQALC AERNQHGLGL RQIQAMARQF QQL
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