Gene Shew_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1663 
Symbol 
ID4923419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1912571 
End bp1913092 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID640163225 
Producthypothetical protein 
Protein accessionYP_001093789 
Protein GI127512592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.039673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0367113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCATT TTGAGTGTGA CCTCGGTGAC CTCGGGGCAG AAGTGCTGAC ACAAGACGCT 
GCAACTGCGG CGGACAGTCT CAACAGCCAG CTAGCGATCA TCATGCGCGG CCTGCCAGGC
AGTGGTAAGA GTCACTGGGT CGATAGCTTC ATTGCCGCTC GCCCCGACGG TGAGGCGATT
CGCCGCCGCG GCTACTTCTC TACCGACGAT CGTTTCATCA TTGCAGGTGA GTACCGCTTC
GATGCCAGTA AGCTGTCTGA ATATCATCAG CTTAACCTTA CCGGTTTCAT TCAGGCCTTG
TCGCGCCGGG AGCCCGTAGT GATCTGCGAT AACACCAACA TGGCCCACTG GGAGTTTATG
GCCTACGAGG CCGCCGCCAA GGCGATGGGC TATCAGGTGC GCATTTTGCT GATTGGCGAT
CCCGAGGATG AGGCGCATCA GGCGCTGTGC GCCGAGCGTA ATCAGCACGG CCTGGGGCTC
AGGCAGATCC AGGCGATGGC GCGTCAATTC CAGCAGCTGT GA
 
Protein sequence
MSHFECDLGD LGAEVLTQDA ATAADSLNSQ LAIIMRGLPG SGKSHWVDSF IAARPDGEAI 
RRRGYFSTDD RFIIAGEYRF DASKLSEYHQ LNLTGFIQAL SRREPVVICD NTNMAHWEFM
AYEAAAKAMG YQVRILLIGD PEDEAHQALC AERNQHGLGL RQIQAMARQF QQL