Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1657 |
Symbol | sucC |
ID | 4920808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1906416 |
End bp | 1907582 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640163219 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_001093783 |
Protein GI | 127512586 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0504146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.508057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGC ATGAGTATCA GGCAAAAGCC CTATTTGCCG AATATGGTTT ACCAGTGTCA GAAGGTTATG CTTGTGATAC CCCTCAAGAG GCGGTAGAAG CGGCTGGCCA TATTGGCGGA GATATGTGGG TTGTTAAGTG TCAAGTACAC GCAGGCGGCC GTGGTAAAGC AGGTGGCGTT AAAGTTACCG GCGATAAAGA AGAGATCAGA GCATTTGCTG AGCATTGGTT AGGTAAGAAC CTAGTAACTT ATCAGACTGA CGAAAAAGGT CAGCCAGTTG CTAAGATCCT AGTCGAAAGC TGCACTGATA TCGCAAACGA GCTGTACCTA GGTGCCGTTG TTGACCGTGC GACCCGTCGC GTTGTCTTCA TGGCGTCTAC CGAAGGTGGC GTTGAGATTG AAACAGTTGC CGAAGAGACA CCTGAGCTGA TCCACAAGGC GATTATCGAT CCTTTGACAG GTCCTCAGCC TTACCAGGCA CGCGATCTTG GCTTCAAGTT GGGTCTGAAC CCAACTCAGA TGAAGCAGTT CACTAAAGTC TTCATGGGTC TGGCGACTAT GTTCACCGAT CACGACTTCG CACTGCTTGA GATCAACCCT CTGGTTATCA CCACCGAAGG CAACATCCAC TGTCTAGACG GTAAGATTGG TATCGATGGC AACGCACTGT TCCGTCAACC AAAGATCCGT GACATGCACG ATCCATCACA GGATGACGCT CGTGAAGCTC ACGCGGCGAA ATTCGAGCTG AACTATGTTG CCCTAGACGG TAACGTAGGC TGCATGGTAA ACGGTGCCGG CCTAGCAATG GGTACTATGG ACATCGTTAA CCTGCACGGT GGCAAGCCAG CTAACTTCCT GGACGTTGGT GGCGGCGCGA CTAAAGAGCG TGTTGCTGAA GCATTCAAGA TCATCTTGTC TGACGCTAAC GTGAAAGCGG TTCTGGTTAA CATCTTCGGT GGTATCGTAC GTTGTGACAT GATCGCAGAA GGTATCATTG GTGCCGTTAA AGAAGTGGGT GTTGAAGTGC CAGTGGTTGT TCGTCTAGAA GGTACTAACG CAGATCTAGG TCGCGAAGTA TTGGCTAACT CTGGTCTTGA CATTATTGCA GCCGAGTCGC TAACCGACGC TGCTGTTAAA GTTGTTGCTG CTGCGGAGGG CAAATAA
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Protein sequence | MNLHEYQAKA LFAEYGLPVS EGYACDTPQE AVEAAGHIGG DMWVVKCQVH AGGRGKAGGV KVTGDKEEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR VVFMASTEGG VEIETVAEET PELIHKAIID PLTGPQPYQA RDLGFKLGLN PTQMKQFTKV FMGLATMFTD HDFALLEINP LVITTEGNIH CLDGKIGIDG NALFRQPKIR DMHDPSQDDA REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE AFKIILSDAN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VEVPVVVRLE GTNADLGREV LANSGLDIIA AESLTDAAVK VVAAAEGK
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