| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1655 |
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| Symbol | sucA |
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| ID | 4921041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1902267 |
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| End bp | 1905089 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163217 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001093781 |
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| Protein GI | 127512584 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.338838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.90286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCGTCTC ATTTAAACGG GGCTAATTCG
ACCTATGTAG AAGAGATGTA TGAAGCCTAT CAAGAGGACC CTCAGTCAGT ATCAGAAGAC
TGGCGAGCGG TGTTTGATAA CCTCCCATAT GCCAACGGTG CAACAGCAGA TGTGCCCGAA
GCTGCCCACT CTAAAGTACG TGAATATTTC CGTAGTTTGG CGCTAGACGG TCGTCACAAG
AGCGCTGCTC GTGTGACAGA TCCAGAAGTC GATGCCAAAC AGGTTAAAGT TCTTCAGTTG
ATCAACGCCT ACCGTTTCCG CGGCCACCAG AATGCGAATC TGGATCCCCT CGGGCTATGG
AAGCGCGATA CCGTCTCTGA ATTGGACCCG GCCTTCCACG GCTTAACCGG CGAAGATATG
GAGCGTGAAT TCAACACTGG TTCATTTGCT CACGGTGGCG ACACCATGAA GCTGGGTGAT
CTGGTTAAAG CACTGAAAGC AACCTATTGT GCTGCTATCG GCGCGGAATA CATGCACATC
ACAGATACCG ATGAGAAGCG TTGGATCCAA CAACGCTTGG AGCCGTCATT AGGTAGAGCG
AATTACGATA AAAACACCAA GACACGTATC CTCGAGGGCC TGAACGCCGC CGAAGGTATG
GAGAAATATC TCGGCGCCAA GTTCCCCGGC GCAAAACGTT TCTCACTGGA AGGTGGTGAC
GCGCTCGTCC CTATGATGCG TGAAATCATC TACCGTGGCG GTGAAGCGGG TACTAAAGAG
ATCGTCGTGG GCATGGCTCA CCGTGGTCGT CTAAACCTGC TGGTTAACAT CTTAGGTAAG
AAGCCATCAG AACTCTTCGA CGAGTTCGCC GGTAAGCACA GCGATGAGCT CAACGGTTCG
GGTGACGTTA AGTATCACCA AGGTTTCTCA TCAGATTTCG AAACACCGGG CGGCAACGTG
CACCTGGCAC TGGCGTTTAA CCCGTCGCAC CTTGAGATCG TTAACCCTGT GGTCATGGGC
TCGGTAAGAG CACGTCTGGA CCGCCGCGGT TGTAAGACGG GTCTTCAGGT GATGCCTATT
ACTGTTCATG GTGACAGCGC CATCGCAGGT CAGGGCATAG TACAAGAGAC ATTCAACATG
TCTCAGACCC GAGCCTTCAA GGTGGGCGGC AGTATCCGTA TTGTGGTCAA CAACCAGGTG
GGCTTTACTA CCAACCTGAC TGAAGATACC CGTTCAACCG AGTACTGTAC CGATATCGCC
AAGATGGTAC AGGCGCCTAT CTTCCACGTG AACGCAGACG ACCCAGAATC GGTTGCCTTC
GTTGCTCAGC TGGCGGTTGA TTATCGTAAC GAGTTTAAGC GTGACGTAGT GATCGATCTG
GTCTGTTACC GTCGTCACGG CCACAATGAG GCCGACGAGC CGAGTGCAAC TCAGCCGCTG
ATGTATGCCA AGATCAAGAA ACATCCAACG CCACGTAAGA TCTATGCCGA CCGTCTGATC
GAAGAGCAGA CCCTAGGTGC AGATGATGTG ACCGCGATGA TCAACGACTA CCGCGACGCG
CTAGATAAAG GCGATTGCGT AGTTAAAGAG TGGCGTCCAA TGACGCTGCA CACGGTTGAC
TGGACACCTT ATCTTAACCG CGAGTGGGAC GAGGCTTATC CTGCCGAGTT GCCGCTAGAT
CGCGTTAAGG CGTTGGCTGA TAAGATCAGC TACGTGCCAG AGAGCCACAA GCTACAGTCG
CGTGTTGCTA AGATCTACAA AGACCGTGTG GCCATGGCCG CCGGTGACAA GCTGCTGGAC
TGGGGCTTTG CCGAGACACT AGCCTACGCC TCGATTTTGG ATGACAACAA GCGCGTGCGT
ATCACAGGTC AAGACTCTGG CCGTGGTACC TTCTTCCACC GTCACGCCGT GCTGCACAAC
CAAAATGATG CGACAGCTTA TCTGCCGCTG CGTCACCTGT CTGACATGCA AGGCCCTATC
GATATCTCTG ACTCGGTATT GTCTGAAGCC TCAGTATTGG CGTTCGAATA TGGTTATGCC
ACGGCTGAGC CGGGCGGCCT GACCATTTGG GAAGCCCAGT TCGGTGACTT CGCTAACTGT
GCCCAGGTAG TGATCGATCA GTTCCTCTCT TCTGGCGAGC AGAAGTGGGG CCGTCTGTGT
GGTTTGACCA TGCTGTTGCC ACATGGCTAC GAAGGTCAGG GCCCAGAGCA CTCGAGTGCA
CGTCTGGAGC GTTTCCTGCA GCTGTGTGCT AACCACAACA TGCAGGTGTG TGTCCCATCG
ACACCGGCAC AGGTTTACCA CATGCTACGC CGTCAGGTAG TGCGTCCTAT GCGTCGTCCT
CTGGTGGTGA TGTCACCTAA GTCACTGCTG CGTCATCCGC TGGCGGTGTC TAGCCTGGAA
GAGCTGGCCG AAGGCACCTT CCAGAATGTG ATAGCCGAGA TTGACGAGCT CGATAGCAGC
AAGGTCGATC GCGTGGTCTT CTGTAGCGGT AAGGTTTACT TCGAACTGCT CGAGAAGCGT
CGTAAAGAGA ACCTGGACAA CGTTGCTCTG ATCCGTGTAG AACAACTGTA CCCGTTCCCA
CACGAAGATA TGGCACAGAT CCTCGCCCAG TATCAGCACG TTAAAGATTT CGTTTGGTGT
CAGGAAGAAC CTCAGAACCA GGGCGCTTGG TATTGCAGCC AGCACCACTT CTGGGCCGCC
ATTCCTGCCG GAGCTCAATT AACCTATGCG GGTCGTGAAG CCTCGGCCGC GCCAGCATGT
GGTTATCCGG CCCTGCACAC CCAGCAGCAA GAATCTTTAA TCAATAGCGC ATTAAAACTG
TAG
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| Protein sequence | MHQGIMKAWL ESSHLNGANS TYVEEMYEAY QEDPQSVSED WRAVFDNLPY ANGATADVPE
AAHSKVREYF RSLALDGRHK SAARVTDPEV DAKQVKVLQL INAYRFRGHQ NANLDPLGLW
KRDTVSELDP AFHGLTGEDM EREFNTGSFA HGGDTMKLGD LVKALKATYC AAIGAEYMHI
TDTDEKRWIQ QRLEPSLGRA NYDKNTKTRI LEGLNAAEGM EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRGGEAGTKE IVVGMAHRGR LNLLVNILGK KPSELFDEFA GKHSDELNGS
GDVKYHQGFS SDFETPGGNV HLALAFNPSH LEIVNPVVMG SVRARLDRRG CKTGLQVMPI
TVHGDSAIAG QGIVQETFNM SQTRAFKVGG SIRIVVNNQV GFTTNLTEDT RSTEYCTDIA
KMVQAPIFHV NADDPESVAF VAQLAVDYRN EFKRDVVIDL VCYRRHGHNE ADEPSATQPL
MYAKIKKHPT PRKIYADRLI EEQTLGADDV TAMINDYRDA LDKGDCVVKE WRPMTLHTVD
WTPYLNREWD EAYPAELPLD RVKALADKIS YVPESHKLQS RVAKIYKDRV AMAAGDKLLD
WGFAETLAYA SILDDNKRVR ITGQDSGRGT FFHRHAVLHN QNDATAYLPL RHLSDMQGPI
DISDSVLSEA SVLAFEYGYA TAEPGGLTIW EAQFGDFANC AQVVIDQFLS SGEQKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERFLQLCA NHNMQVCVPS TPAQVYHMLR RQVVRPMRRP
LVVMSPKSLL RHPLAVSSLE ELAEGTFQNV IAEIDELDSS KVDRVVFCSG KVYFELLEKR
RKENLDNVAL IRVEQLYPFP HEDMAQILAQ YQHVKDFVWC QEEPQNQGAW YCSQHHFWAA
IPAGAQLTYA GREASAAPAC GYPALHTQQQ ESLINSALKL
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