| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1650 |
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| Symbol | gltA |
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| ID | 4921802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1897131 |
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| End bp | 1898417 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163212 |
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| Product | type II citrate synthase |
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| Protein accession | YP_001093776 |
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| Protein GI | 127512579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000481967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA ATATAGCCAA ATTGGAACTA CCAGGGAACG ATTCGATTGA CCTGCCTATT
AAGAAAGGAA CGGCGGGATT TGATGTTATC GACATCAGCA AACTCGGTAG CAAAGGTCAT
TTTACATTTG ACCCAGGATT CCTAGCGACA GCATCCTGCG AATCAGCTAT CACTTACATT
GATGGCGCCC AAGGTATACT TTTACACCGT GGTTACGCGA TCGACGAACT TGCCGTCGAC
TCAGACTATT TAGATCTTTG TTATCTACTG CTTTACGGTG AGTTACCTAA CAAGGCTCAA
TACGACAAAT TCGTTTACAC GGTTAAGACC CACACTATGG TTAACGAGCA ACTGGCTTCG
TTCTTCCGTG GTTTCCGCCG TGACGCACAC CCGATGGCCA TGCTATGTGG CGTAACCGGT
GCATTGTCTG CATTCTACCA AGACTCTCTC GATGTCAACG ACGAACACCA CCGCGAAATT
GCGGCGTTCC GTTTAGTCTC TAAGATGCCG ACTATCGCCG CTATGTGTTA CAAGTATTCA
ATTGGTCAGC CATTTGTTTA CCCACGTAAC GACCTAAGCT ATGCGGGCAA CTTCCTAAGC
ATGATGTTTG CCGTTCCTTG TGAAGAGTAC AAGGTTAACC CAATCATCGA ACGCGCTATG
GACCGTATCT TTATCCTGCA CGCAGACCAT GAGCAAAACG CCTCTACCTC TACCGTGCGT
CTAGCCGGTT CATCGGGTGC TAACCCATTT GCGTGTATTG CAGCGGGTAT CGCCTCACTA
TGGGGCCCTG CACATGGCGG CGCGAACGAA GCGTGTCTGA ACATGCTAGA AGAGATCGGC
ACAGTCGATC GCATTCCTGA GTTCATCGCT CGTGCGAAGG ACAAAGAAGA TCCATTCCGT
CTGATGGGCT TCGGTCACCG CGTTTACAAG AACTTCGACC CTCGCGCCAA GGTTATGCGC
GAAACCTGTC ACGAAGTCCT TGCTGAGCTT AAGGTCGATG ATCCGCTGCT CGACGTGGCG
ATGGAACTTG AGCGTATCGC ATTGGAAGAT GAGTACTTCG TATCGAAGAA ACTCTATCCA
AACGTCGATT TCTACTCAGG CATCATCATG AAGGCTATCG GCATTCCAAC AAGCATGTTC
ACCGTACTGT TCGCCCTGGC GCGTACCGTG GGTTGGATTG CACACTGGAA AGAGATGTTG
GACCAGCCTG GTCACAAGAT CAGCCGTCCA CGCCAGCTCT ACACAGGCTC ACCAGAACGC
GACTTCGTCA AACTGGACAA GCGTTAA
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| Protein sequence | MADNIAKLEL PGNDSIDLPI KKGTAGFDVI DISKLGSKGH FTFDPGFLAT ASCESAITYI
DGAQGILLHR GYAIDELAVD SDYLDLCYLL LYGELPNKAQ YDKFVYTVKT HTMVNEQLAS
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDEHHREI AAFRLVSKMP TIAAMCYKYS
IGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIIERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLNMLEEIG TVDRIPEFIA RAKDKEDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLAEL KVDDPLLDVA MELERIALED EYFVSKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGSPER
DFVKLDKR
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