| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1648 |
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| Symbol | |
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| ID | 4921207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1892055 |
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| End bp | 1895303 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163210 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001093774 |
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| Protein GI | 127512577 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATAA TAAATACTTC CGTTAAACGG CCGGTATCCG TGTGGATGTT TATGCTGGCG
GTGATCCTCT TTGGCATGGT GGGTTTCTCT CGCCTGGCGG TGAAACTCCT GCCGGATCTC
AGCTACCCGA CCATCACCAT ACGCACCCAA TATGAAGGCG CCGCGCCGGT CGAGGTGGAG
CAGCTTGTCT CTAAGCCTAT CGAAGAGGCC GCCGGTATCG TTAAGGGGCT GCGTAAGATA
AGCTCCATCT CCCGCTCTGG CATGTCAGAT GTGGTGCTCG AATTCGAATG GGGCACAGAT
ATGGATATGG CGAGCCTGGA GGTGAGGGAA AAGCTAGACA CCATAGAGCT GCCCCTGGAT
GTGAAGAAAC CGCTGTTGCT GCGCTTTAAC CCCAATCTAG ATCCTATCGT GCGTCTGGCC
CTCTCACTGC CCGACGCCGA TGCGCAATCG CTTAAGCAGA TGCGCACCTT TGCCGAGGAG
GAGCTCAAGC GTCAGCTGGA ATCCCTCAGC GGCGTCGCGG CCGTCAGACT CTCCGGCGGC
CTCGAGCAAG AGGTGCATAT TCAGCTCAAT CAGGAGAAGC TGACTCAGTT AAATCTGAAC
GCCGATAAGA TCCGCGAGCG TATCGCCGCC GAAAACATCA ACCTCTCTGC CGGTAAGGTG
GTACAGGGCG AGAAAGAATA TCTGGTGCGA ACCCTCAATC AGTTCAACTC CTTGGATGAG
CTGGGTCAGA TCATCGTCTA TCGCGACAAC CAGACCCTGG TGCGTCTGTT CGAGGTGGCC
GACATCATCG ACAGCCATAA GGAACGCAAC GACATCACCC GCATCGGCTC GGCCGAGTCT
ATCGAGCTGG CCATTTATAA GGAAGGCGAT GCCAACACGG TTGCCGTGGC CCGTAAAGTC
ACCGCTAAAC TTAACGACCT CAAGAAGCTA AACGAGAAGG CTGAGCTTAA GGTTATCTAC
GATCAATCCG AGTTTATCGA GAGCGCAGTC AGCGAGGTCA CCTCGGCGGC GCTGATCGGT
AGCTTACTCT CCATGCTGGT GATCTACCTG TTCCTCAGGG ACATAGTGCC TACCCTGATC
ATCTCCATCT CGATTCCGTT TTCGGTGATC GCCACCTTTA ACATGATGTA TTTTGCCGAC
ATCAGCCTCA ACATCATGTC GCTTGGCGGT ATCGCCCTGG CGGTGGGGCT CCTGGTGGAC
AATGCCATCG TGGTATTGGA AAACATCGAC CGCTGTCGCA AGCTGGGGAT GAATAAGCTC
GACGCCGCCG TGACTGGCAC CAAAGAGGTG GCCGGCGCTA TCTTCGCCTC TACCATGACC
ACCCTGGCGG TATTCGTGCC GCTGGTGTTT GTCGATGGCG TCGCCGGTGC CCTGTTCTCG
GATCAGGCGC TGACAGTCAC CTTCGCCCTG TTGGCCTCGC TGTTGGTCGC GCTGACCACC
ATCCCTATGC TGGCATCGCG CGAAGGCTTC AAGGCCCTGC CGCACCTGGT GCAGAAACGT
GAGAAGCCTG TGCTCGACAC TAAACTGGCC AAGGTGAAGC ATTACGGTGC CACCGTCTGC
TCCTTCCCCT TCGTGCTACT GTTTAGCTAT CTGCCGTCAC TGCTACTGAC CCTAGCCTTG
ATGCTGAGCC GTGCGTTTTC ATGGCTTGCG GGCCTTATCA TGCGCCCCAT CAGTCTGGCA
TTTAACTGGT TCTATCACCT GCTCGAAGGT GTCTATCACA AGCTGCTGCG TCAGGCGCTT
AAGTTTACCT GGGTGACACT GGCTATCGCC CTTACCCTCA CCTTAGGCAC CATGAGCCTT
ATACCAAGAC TCGGCATGGA GCTGATCCCG CCGATGAATC AGGGCGAGTT CTATGTAGAA
GTCCTGCTGC CGCCGGGCAC AGAAGTCAGT GAGACAGACA GAGTGTTACA AAAGCTGGCC
TTGTCTATCA AAGACAGGGA AGATGTAAAA CATGCCTACA GCCAAGCCGG TAGCGGCGGT
CTGATGACCT CAGACACCTC GCGCGGCGGC GAAAACTGGG GCCGTCTGCA GGTGGTGCTG
GCCGATCATC AGGCCTTCGA TGCAGTCACC CATGTGCTGC GCACCACAGC CATGCGTATC
CCTGAGCTAG AGGCCAAGAT CCAACATCCA GAGCTGTTTA GCTTCAAGAC CCCGCTTGAG
ATAGAAGTGA TAGGCTATGA CTTAACTCAG CTCAAGCAGA CCGCCGATAA CCTCATCAGC
GCGCTGTCTG ACTCAGATCG CTTTGCCGAC CTCAACACCA GTCTGCGTGA TGGTCAGCCA
GAGCTGAGCA TCCGCTTCGA TCATGCTCGT CTCGCCGCTT TGGGTATGGA CGCGCCAACC
GTCGCTAACC GCATCGCCCA GCGCATCGGT GGCACTGTGG CCAGCCAATA CACGGTACGC
GACAGAAAGA TCGACATCCT GGTGCGCAGC GAACTCGAGG AGCGCGACCA GATAAGCGAT
ATCGATTCGA TGATCATCAA CCCCAACAGC AATCAGCCTA TTCCACTGAG CGCCGTTGCC
GATGTCTCCT TGAATCTGGG CCCCTCTGCC ATCAACCGTA TCAGCCAGCA ACGCGTGGCT
ATCGTGTCAG CTAACCTCGC CTATGGCGAT CTTAACGACG CCGTGCTGGA GGCGAGAAGC
ATCATAGACC AGCAGAATCT GCCTAGCTCG ATTCAGGTGC GCTTCGGCGG CCAGAATGAA
GAGATGGAGC ACTCGTTCCA GTCGCTGCAG ATCGCCCTGA TCTTGGCCGT CTTCCTGGTG
TACCTGGTTA TGGCGAGTCA GTTCGAGTCC CTGGTGCATC CGCTGCTTAT TCTTATCGCC
GTACCTATGG CGGTAGGCGG CAGCATCTTT GGCCTGTTCA TTACTCAGAC CCACCTGAGT
GTGGTAGTCT TCATCGGGCT TATCATGCTG GCGGGTATCG TCGTTAACAA CGCCATCGTC
CTAGTCGATC GCATCAATCA GCTGCGTCAG CAAGGCATCG AAAAACTCAG CGCCATCGAA
GAGGCCGCCA AGTCACGTCT GCGTCCCATC GTCATGACCA CTATGACGAC GGCTCTGGGT
CTGGCGCCAA TGGCACTGGG CTTAGGCGAT GGCAGCGAGG TACGTGCGCC CATGGCGATC
ACCGTTATCT TCGGTCTGTC ACTGGCCACC CTACTGACAC TCGTGGTGAT CCCGGCGCTA
TATGCCCTGT TCGATCGCAA GGCCTTTGAC GCGCCGGCCA AAGTGGCTCA AGAGGGAGAA
TCAGCATGA
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| Protein sequence | MSIINTSVKR PVSVWMFMLA VILFGMVGFS RLAVKLLPDL SYPTITIRTQ YEGAAPVEVE
QLVSKPIEEA AGIVKGLRKI SSISRSGMSD VVLEFEWGTD MDMASLEVRE KLDTIELPLD
VKKPLLLRFN PNLDPIVRLA LSLPDADAQS LKQMRTFAEE ELKRQLESLS GVAAVRLSGG
LEQEVHIQLN QEKLTQLNLN ADKIRERIAA ENINLSAGKV VQGEKEYLVR TLNQFNSLDE
LGQIIVYRDN QTLVRLFEVA DIIDSHKERN DITRIGSAES IELAIYKEGD ANTVAVARKV
TAKLNDLKKL NEKAELKVIY DQSEFIESAV SEVTSAALIG SLLSMLVIYL FLRDIVPTLI
ISISIPFSVI ATFNMMYFAD ISLNIMSLGG IALAVGLLVD NAIVVLENID RCRKLGMNKL
DAAVTGTKEV AGAIFASTMT TLAVFVPLVF VDGVAGALFS DQALTVTFAL LASLLVALTT
IPMLASREGF KALPHLVQKR EKPVLDTKLA KVKHYGATVC SFPFVLLFSY LPSLLLTLAL
MLSRAFSWLA GLIMRPISLA FNWFYHLLEG VYHKLLRQAL KFTWVTLAIA LTLTLGTMSL
IPRLGMELIP PMNQGEFYVE VLLPPGTEVS ETDRVLQKLA LSIKDREDVK HAYSQAGSGG
LMTSDTSRGG ENWGRLQVVL ADHQAFDAVT HVLRTTAMRI PELEAKIQHP ELFSFKTPLE
IEVIGYDLTQ LKQTADNLIS ALSDSDRFAD LNTSLRDGQP ELSIRFDHAR LAALGMDAPT
VANRIAQRIG GTVASQYTVR DRKIDILVRS ELEERDQISD IDSMIINPNS NQPIPLSAVA
DVSLNLGPSA INRISQQRVA IVSANLAYGD LNDAVLEARS IIDQQNLPSS IQVRFGGQNE
EMEHSFQSLQ IALILAVFLV YLVMASQFES LVHPLLILIA VPMAVGGSIF GLFITQTHLS
VVVFIGLIML AGIVVNNAIV LVDRINQLRQ QGIEKLSAIE EAAKSRLRPI VMTTMTTALG
LAPMALGLGD GSEVRAPMAI TVIFGLSLAT LLTLVVIPAL YALFDRKAFD APAKVAQEGE
SA
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