| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1646 |
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| Symbol | |
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| ID | 4920978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1888021 |
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| End bp | 1888899 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163208 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001093772 |
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| Protein GI | 127512575 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA TCTTACGCTT TGCGCTGACA AGCCTGCTCA TCGGCAGTTA TGGCATCAGC
ATCAATAGCT TGGCCGACGA AGATAAGTTT GCCAAGGTCG AAATAGCGGC CACCAAACTT
TCAGAACATG TCTATATGCT GACCGGCGCC GGCGGCAACA TAGGCGTATC TGCGGGAGAA
GATGGTCTGC TGATCATCGA CGATCAGTTT GCCCCACTGG CGGACAAGAT TAGCGCGGCG
CTGGCCGACA TCCAGGCGGG CAAACCTAAA TATATCGTCA ACACCCACTA CCATGGCGAT
CATACCGGCG GCAACGGTTT CTTTGGCCAA ACCGGCACCA TCTTCGCCCA TGACAATGTG
CTCAAACGCT TGGCCAGTAA CCAAGACTTC ACTAAACAGG CCTTACCCAG CATCACCTAT
GATCAGGGGA TCAATATCCA CTTCAATGGC GACACGCTCT CACTCGTGCA CCTGGGCGCA
GGCCATACAG ATGGTGATAG CGTGATCTTC TGGCGTGATG CTCCTGTGGT GCATATGGGG
GATCTCTTCT TTAAAGACAG ATTTCCCTAT ATCGATCTTA AAGGAGGTGG CTCGGTGCTT
GGCTATCGCG ACAGCGTCGC CACCATCTTG GCCAGGGTCG ATGACAACAC CAAAATCATT
CCGGGACACG GCGAACTTGC CAACAAGCAA GATCTGGTCA AGTTCAAGCA GATGTTAGAC
ACCTCTATCG ACTGGATGAA CACCCAGCTC AAATCGGGCA AGTCGCTCGA TGCCATCAAG
CAGCAAGGCT TACCGGACGA CTTACAGGGC TGGGGATGGA AATTTATCTC TCAGGAAACC
TGGATAGAAA CCCTCTATAA CGGCCTTAAG AGTCGATAA
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| Protein sequence | MNNILRFALT SLLIGSYGIS INSLADEDKF AKVEIAATKL SEHVYMLTGA GGNIGVSAGE
DGLLIIDDQF APLADKISAA LADIQAGKPK YIVNTHYHGD HTGGNGFFGQ TGTIFAHDNV
LKRLASNQDF TKQALPSITY DQGINIHFNG DTLSLVHLGA GHTDGDSVIF WRDAPVVHMG
DLFFKDRFPY IDLKGGGSVL GYRDSVATIL ARVDDNTKII PGHGELANKQ DLVKFKQMLD
TSIDWMNTQL KSGKSLDAIK QQGLPDDLQG WGWKFISQET WIETLYNGLK SR
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