Gene Shew_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1644 
Symbol 
ID4922362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1885352 
End bp1886140 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID640163206 
ProductDSBA oxidoreductase 
Protein accessionYP_001093770 
Protein GI127512573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCTA CTCATTCGAC AGTGATAGTC TGCCTATCTT TGCTGTTTTT TACTGCTGCC 
TGTCAGCAAA AAAATGACGA CAAGTTAGAG AAGGAGCTCG CCTACCTGAA ACAGGAGATG
GGCCAATTAA AACAGCAAGT GGCCATTATG GGCAGCCAGG TGAAAGAGAT ACACACCATT
GCCATGAAGA GTCAGGAACC GCAGCATAGA AGCCTACCAA CGCAAATAAA TCCGGGCGAA
GATGGTAAGC TCCCGGCCTT AGGCGAGGCG ACGGCGCAGG TCGCCATCAT AGAGTTTTCC
GATTATCAAT GTCCCTACTG CAAACGATAC ATGGACAACA CCTTCACCAA GATCAAAAGC
GACTATATCG ACACCGGCAA GGTGAAATAT ATCGCCAGAG ACTTCCCCTT AGGTTTTCAC
CCTAAGGCTA AAGGCGCTGC CATAGCCGCC AACTGTAGCC TGCAACAGGA CGCTTATTGG
CCCATGCGTG ACGCCCTGTT TAAAAACATG AGGCAACTAG GGGACAAACT CTACCAAGAT
ACCGCCACCC AGCTCTCGCT AGACATGACA AAATTCGCTG CCTGCCTGGA AGATCAAGCC
ATCATGAGCA AGATAGAGCA GGATATCGGC TATGGCTCAT CGATAGGCGT TCGTGGTACG
CCAAGCTTCC TCATAGGTAA ACTGGAAAAC AATCGACTCA TAGAGCCCAA GCTAGTGGTT
GGTGCACAAA GCTATGACAC TTTCAAAGCG GTGATCGACG CCTTAGAAAA ACCGACCCAG
ACGAATTAA
 
Protein sequence
MPSTHSTVIV CLSLLFFTAA CQQKNDDKLE KELAYLKQEM GQLKQQVAIM GSQVKEIHTI 
AMKSQEPQHR SLPTQINPGE DGKLPALGEA TAQVAIIEFS DYQCPYCKRY MDNTFTKIKS
DYIDTGKVKY IARDFPLGFH PKAKGAAIAA NCSLQQDAYW PMRDALFKNM RQLGDKLYQD
TATQLSLDMT KFAACLEDQA IMSKIEQDIG YGSSIGVRGT PSFLIGKLEN NRLIEPKLVV
GAQSYDTFKA VIDALEKPTQ TN