Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1644 |
Symbol | |
ID | 4922362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1885352 |
End bp | 1886140 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640163206 |
Product | DSBA oxidoreductase |
Protein accession | YP_001093770 |
Protein GI | 127512573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCTA CTCATTCGAC AGTGATAGTC TGCCTATCTT TGCTGTTTTT TACTGCTGCC TGTCAGCAAA AAAATGACGA CAAGTTAGAG AAGGAGCTCG CCTACCTGAA ACAGGAGATG GGCCAATTAA AACAGCAAGT GGCCATTATG GGCAGCCAGG TGAAAGAGAT ACACACCATT GCCATGAAGA GTCAGGAACC GCAGCATAGA AGCCTACCAA CGCAAATAAA TCCGGGCGAA GATGGTAAGC TCCCGGCCTT AGGCGAGGCG ACGGCGCAGG TCGCCATCAT AGAGTTTTCC GATTATCAAT GTCCCTACTG CAAACGATAC ATGGACAACA CCTTCACCAA GATCAAAAGC GACTATATCG ACACCGGCAA GGTGAAATAT ATCGCCAGAG ACTTCCCCTT AGGTTTTCAC CCTAAGGCTA AAGGCGCTGC CATAGCCGCC AACTGTAGCC TGCAACAGGA CGCTTATTGG CCCATGCGTG ACGCCCTGTT TAAAAACATG AGGCAACTAG GGGACAAACT CTACCAAGAT ACCGCCACCC AGCTCTCGCT AGACATGACA AAATTCGCTG CCTGCCTGGA AGATCAAGCC ATCATGAGCA AGATAGAGCA GGATATCGGC TATGGCTCAT CGATAGGCGT TCGTGGTACG CCAAGCTTCC TCATAGGTAA ACTGGAAAAC AATCGACTCA TAGAGCCCAA GCTAGTGGTT GGTGCACAAA GCTATGACAC TTTCAAAGCG GTGATCGACG CCTTAGAAAA ACCGACCCAG ACGAATTAA
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Protein sequence | MPSTHSTVIV CLSLLFFTAA CQQKNDDKLE KELAYLKQEM GQLKQQVAIM GSQVKEIHTI AMKSQEPQHR SLPTQINPGE DGKLPALGEA TAQVAIIEFS DYQCPYCKRY MDNTFTKIKS DYIDTGKVKY IARDFPLGFH PKAKGAAIAA NCSLQQDAYW PMRDALFKNM RQLGDKLYQD TATQLSLDMT KFAACLEDQA IMSKIEQDIG YGSSIGVRGT PSFLIGKLEN NRLIEPKLVV GAQSYDTFKA VIDALEKPTQ TN
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