| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1629 |
|---|
| Symbol | |
|---|
| ID | 4923472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1861962 |
|---|
| End bp | 1862900 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640163191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001093755 |
|---|
| Protein GI | 127512558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000041783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.218366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAAAA AGAGTCTTTT ATTGGTGACC ACCCTTGCCT CACTATCCGG CGCCGCCTGG
GCAGATAACG AGCGTTGGTT TGAGGTGGAA GTTTACCTGT TTGAGCGTCA GGGAAGTCAA
TTGGAAGAAA CCTTGGCAAG CCCAGGCAAT CGCCACACGC GTCAACCGAT AGACATGATC
TCGCCGCTGT TTGCCACGGA TATTACCGGT GCCAGCCTGG GCCTCGAGGG CTGCAGCGCC
CAGCAGTGGC TGGAAACGCC TGAAGATTGC GACAAGCAGC TGCAACAGGC GCAGGTGACT
CAACCTAGCC AGATCCCAAG CACCATAGGC GCGCCAACCC CCCAATATGC CACCTTAGGG
GCCGGCACTG TCTTATTGGC CGACTCCCAG TCGCAGTTTG GCGAGATGAT TACCACCTTA
AAGCGCGAAG CCGGACACAA GAGCCTGCTG CATATGACCT GGCAACAATC TATGCTGCCC
CGTCATCTGG CGAAACCCGT GCGTCTCTAC GGCGGTGAAG ATTTCTCAGA TCGCTTCAAT
GAGGATGGCT ACGCGGTAAA TGCGGCGCCC CAAAGTGATA CCAGCGGCAT TCCACAATTT
AACTTCGATC TGAATTTCGA GGAGAAGCAG GCGCCCCCTA TTTGGGCACT GGATGGCACG
CTCAACATCT ATCTGAACCA TTACCTCTAT GTGGAAACGG CGTTAACCCT GCACAGGGCT
GGCAGTAAAG CGCAGCCACA GCTTGAGGAT GAGACGGTAA TGAGCCAGGT GCCTTATCTG
TACAACATCT ATATGACGCA GAATAAGCGT GTGAAGAGTG ACGAAATCCA TTATTTCGAT
CACCCTAACA TGGGAATGAT CTTACAGATC AGAAAGATGG AACAGCCCGG CGAGCGCACC
CTCGAGGTGA GCCAGCCAAA CGTGGTCCCG CAGAACTAA
|
|---|
| Protein sequence | MFKKSLLLVT TLASLSGAAW ADNERWFEVE VYLFERQGSQ LEETLASPGN RHTRQPIDMI
SPLFATDITG ASLGLEGCSA QQWLETPEDC DKQLQQAQVT QPSQIPSTIG APTPQYATLG
AGTVLLADSQ SQFGEMITTL KREAGHKSLL HMTWQQSMLP RHLAKPVRLY GGEDFSDRFN
EDGYAVNAAP QSDTSGIPQF NFDLNFEEKQ APPIWALDGT LNIYLNHYLY VETALTLHRA
GSKAQPQLED ETVMSQVPYL YNIYMTQNKR VKSDEIHYFD HPNMGMILQI RKMEQPGERT
LEVSQPNVVP QN
|
|---|
| |