| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1621 |
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| Symbol | |
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| ID | 4922062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1853975 |
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| End bp | 1854898 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163183 |
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| Product | agmatinase |
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| Protein accession | YP_001093747 |
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| Protein GI | 127512550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.644078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0544255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTA TTGCAGATAA GCCTGATTAC TCGCTTTACT CAAATGCATT TGGTTATTTA
AGACAGCCAC TGGATTTTAA ACCGCTCGAG AGCGATGCCG ATGTGGTGGT AATAGGTTTG
CCGTTTGATA TGGCCACTAC GGGTCGTTCT GGCGGCCGTA TGGGTCCTGG CGCTATCCGT
CAGGCGTCGG TCAATCTGGC CTGGGAAGAG TGCCGCTGGC CATGGGACTT TAAGTTGTCC
GATCACCTGA AAATGGTCGA TGCGGGCGAT CTGGTGTTCG ATTGCGGTGA TGCAGCCGAT
TTCACCCAAC GTGTCGAAGA CTTCGCGACG GCCGTGCTCG ACTCTGGCAA GGCGCTAATG
AGCTTTGGTG GCGATCACTT CGTGACCCTG CCGCTGCTGC GTGCTCACTA CAAGAAGCAT
GGCAAGATGG CACTGCTGCA TTTCGATGCG CACACAGACA CCTATAGCCA GGGCAGCAAG
TATGACCACG GCACCATGTT CTTCCACGCG CCAAATGAGG GCATCATCGA TGCTTCTCAC
TCAGTGCAGG TGGGGATCCG TACCGAATAT GACAAGCCAA GCCATCTGTT CAAGGTGATC
GATGCGGCCG CCGCTAACGA GATGACTGCC GATGAGATAG TGGCTCAGAT TAAAGATCGT
GTCGGTGATA TGCCATTGTA TGTCACCTTC GACATCGACT GTCTGGATCC AGCCTTCGCA
CCGGGCACAG GCACGCCTGT ATGTGGCGGT CTCACCAGCG ACAAGGCGAT GAAGATCATT
CGCGGCCTGC GCGGCATGAA TGTTGTCGGT ATGGATGTGG TCGAAGTGGC GCCAGCCTAC
GACAGCGCCG AGATCACCGC ACTGGCCGGG GCCACCTTAG GCCTTGAGAT GCTACACGTT
TGGGCCTGCG CCCATAAGAA GTAA
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| Protein sequence | MTTIADKPDY SLYSNAFGYL RQPLDFKPLE SDADVVVIGL PFDMATTGRS GGRMGPGAIR
QASVNLAWEE CRWPWDFKLS DHLKMVDAGD LVFDCGDAAD FTQRVEDFAT AVLDSGKALM
SFGGDHFVTL PLLRAHYKKH GKMALLHFDA HTDTYSQGSK YDHGTMFFHA PNEGIIDASH
SVQVGIRTEY DKPSHLFKVI DAAAANEMTA DEIVAQIKDR VGDMPLYVTF DIDCLDPAFA
PGTGTPVCGG LTSDKAMKII RGLRGMNVVG MDVVEVAPAY DSAEITALAG ATLGLEMLHV
WACAHKK
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