Gene Shew_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1614 
Symbol 
ID4922779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1846228 
End bp1846434 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content44% 
IMG OID640163176 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001093740 
Protein GI127512543 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.074349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00762568 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCAAG TTACTGGCGT TGTTAAGTGG TTCAACTCTG ACAAAGGTTT TGGTTTTATC 
GAGCAAGAGT CTGGCCCAGA CGTTTTCGTA CACTTCCGTG CGATCAACTC TGACGGTTTC
AAAACTCTAG ACGAAGGTCA GAAAGTGCAG TTCACTGTGA CTCAAGGTCA AAAAGGTCCA
CAAGCTGAGA ACGTAACTGT TATCTAA
 
Protein sequence
MSQVTGVVKW FNSDKGFGFI EQESGPDVFV HFRAINSDGF KTLDEGQKVQ FTVTQGQKGP 
QAENVTVI