| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1609 |
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| Symbol | |
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| ID | 4923392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1840705 |
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| End bp | 1841580 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163171 |
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| Product | 6-phosphogluconate dehydrogenase, NAD-binding |
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| Protein accession | YP_001093735 |
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| Protein GI | 127512538 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000179577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAAAGG TAGCATTTTT AGGATTAGGC GTGATGGGAT TCCCTATGGC GGGGCATCTG
GTGAAGCATG GTCATGAGGT AACTGTCTAC AACCGTACTC AAGCCAAGGC ACAGGCCTGG
TGTGATACCT ATGGCGGTAA CTGGTGTGCC ACCCCAAATG AGGCCGCCAA GGGACAAGAC
TTTGTGTTTG TCTGTGTCGG TAACGATGAC GATCTGCGCT CTGTGGTGCT GGGTGATACC
GGCGCGCTAG CGGCCATGGC GCCGGGTAGC ATACTGGTCG ACCACACCAC GGCATCGGCA
GATGTGGCGC GCGAACTTGG CGCCGCGGCT AAGGCCAAAG GGGTTGGTTT TATCGATGCG
CCAGTTTCTG GCGGACAGGC CGGCGCCGAG AACGGCGTGC TGACCGTCAT GGTGGGCGGC
GAAGCGGCGA ACTTCGAGGC TGCCAAGCCG GTGATGCAGG CCTACGCTCG CTGCGCCGAG
CTGCTGGGTG AAGTGGGTAG CGGTCAGCTG ACTAAGATGG TGAACCAGAT CTGTATCGCC
GGTGTAGTAC AGGGGCTGGC CGAAGGCTTG CATTTTGCTC GCAGTGCCGG CCTAGATGGC
GAGAAGGTGG TTGAGGTGAT CAGCAAAGGT GCCGCACAAT CATGGCAGAT GGAGAATCGC
TATCAAACCA TGTGGCAGGG TCAATATGAC TTTGGTTTCG CCGTCGACTG GATGCGCAAA
GACTTAGGCA TCGCCCTGGG TGAGGCGCGC CGTAACGGCT CACACCTGCC GTTAACCGCA
TTGGTGGACC AATTCTACAG TGAGGTTCAG GCTCAGGGCG GACAGCGCTG GGATACCTCA
AGCCTGTTAG CGCGCCTGGA GAAGAGTCGC GGCTAA
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| Protein sequence | MAKVAFLGLG VMGFPMAGHL VKHGHEVTVY NRTQAKAQAW CDTYGGNWCA TPNEAAKGQD
FVFVCVGNDD DLRSVVLGDT GALAAMAPGS ILVDHTTASA DVARELGAAA KAKGVGFIDA
PVSGGQAGAE NGVLTVMVGG EAANFEAAKP VMQAYARCAE LLGEVGSGQL TKMVNQICIA
GVVQGLAEGL HFARSAGLDG EKVVEVISKG AAQSWQMENR YQTMWQGQYD FGFAVDWMRK
DLGIALGEAR RNGSHLPLTA LVDQFYSEVQ AQGGQRWDTS SLLARLEKSR G
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