Gene Shew_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1606 
Symbol 
ID4921697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1838176 
End bp1838508 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content56% 
IMG OID640163168 
Producthypothetical protein 
Protein accessionYP_001093732 
Protein GI127512535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000122241 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCTTGG TTGGTCTACT CACCGCTAAC CTCAATGGAC TCATTCGTGG TGAGCATTCC 
TTAAGCCTAC CGGTAGGCCT CAAGACCTTC ATCCTTGCCT CTGCCGCCTT TGCCACTGTG
TGGTTTGCGC TGCTGGTCAC CGCCATCTAT AGCGGCGGAG AGACCAACCT GGCAGCTGGC
GTCGAGGTAC TTGTGCTGTT CCTGCTGGGG ATCGGCCTGT ATCGTTTCGT CAAGGTTTCA
AGCATTTTTG GCGAGCAAGC CCTGCTTTGG CTGTTTCGCC TGAGTCTACC GCTGATCCTT
GCGGCCTGTC TTGCGGTGAT CAATTGGGGA TAA
 
Protein sequence
MPLVGLLTAN LNGLIRGEHS LSLPVGLKTF ILASAAFATV WFALLVTAIY SGGETNLAAG 
VEVLVLFLLG IGLYRFVKVS SIFGEQALLW LFRLSLPLIL AACLAVINWG