| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1605 |
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| Symbol | |
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| ID | 4923238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1836749 |
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| End bp | 1837990 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163167 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_001093731 |
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| Protein GI | 127512534 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000914371 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000913501 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTAAAC GTCGTGTAGT CGTCACAGGT ATTGGTCTCG TGACCCCTGT GGGCAATACC
GTAGAGGCGT CCTGGAAAGC CCTGCTTGCG GGACAGAGCG GTATCGCACC GATAACCAAA
TTTGATGCCA GCGAGTTCTC TACTCGTTTT AGCGGCTCGG TCAAAGATTT TGACGTAGAG
CAGTACCTGC CAAAGAAAGA AGCCCGCAAG ATGGATCTCT TCATCCAATA CGGCATGGCG
GCAGGTATCC AGGCGATCCA AGATGCCGGT TTGAATATGG AAGTGGAAGA TCCCACCCGT
GTTGGTACAG CCATCGGCGC CGGTATGGGC GGTATGCCGC TGATCGAGGC GGCCCACTCA
GCCTTGCTAA AGGGCGGTCC ACGCAAGATC TCGCCATTTT TCGTGCCGAG CACCATCATC
AACATGATCG CTGGTCACCT GTCGATCAAG TACGGCATGA CAGGCCCTAA TTTCGCGGTT
ACCACCGCCT GTACCACGGG CGTACATAAT ATCGGCTTTG CCGCACGTAC TATTGCTTAC
GGCGATGCCG ACGTCATGAT TGCCGGTGGC GCAGAAGATG TGACCTGTCC GTTGGCCGTC
GGCGGCTTCG GTTCGGCCAA GGCACTGTCG ACTCGTAACG AAGATCCTGT CGCCGCAAGT
CGTCCTTGGG ACAAAGACAG AGATGGTTTT GTCATAGGTG ATGGCGCTGG CATCATGGTG
ATGGAAGAGT ATGAGCACGC TAAGGCGCGC GGTGCGACCA TCTATGGTGA GCTGGTTGGT
TTTGGTATGA GCGGCGACGC CTTCCATATG ACCTCGCCAC CGGCCGATGG AGCTGGCGCT
GCCCTGGCGA TGGAAAATGC CATCAAAGAT GCGGCTATCG ACAAGCAGCT CGTGGGTTAC
ATTAATGCCC ATGGTACTTC TACGCCAGCA GGTGATAAGG CCGAGGCCTC TGCGGTGAAG
AGTGTGTTTG GCGACCATGC CTACAACCTG CTGGTCAGCT CGACCAAGTC GATGACAGGC
CACCTTCTCG GCGCGGCTGG TGCAGTCGAG GCGATCATCA CCTTGCTTGC ACTGCGCGAT
CAGATGATCC CGCCGACCAT CAACCTGGAT AATCCAGACG AAGGTTGCGA TCTTGATTTC
GTGCCCCATA CGGCACGTAG TCACGCGTTC GATTACGCCC TGTGTAACTC GTTCGGCTTT
GGTGGCACTA ACGGTTCACT GCTGTTTAAA CGTGGCGAGT AA
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| Protein sequence | MSKRRVVVTG IGLVTPVGNT VEASWKALLA GQSGIAPITK FDASEFSTRF SGSVKDFDVE
QYLPKKEARK MDLFIQYGMA AGIQAIQDAG LNMEVEDPTR VGTAIGAGMG GMPLIEAAHS
ALLKGGPRKI SPFFVPSTII NMIAGHLSIK YGMTGPNFAV TTACTTGVHN IGFAARTIAY
GDADVMIAGG AEDVTCPLAV GGFGSAKALS TRNEDPVAAS RPWDKDRDGF VIGDGAGIMV
MEEYEHAKAR GATIYGELVG FGMSGDAFHM TSPPADGAGA ALAMENAIKD AAIDKQLVGY
INAHGTSTPA GDKAEASAVK SVFGDHAYNL LVSSTKSMTG HLLGAAGAVE AIITLLALRD
QMIPPTINLD NPDEGCDLDF VPHTARSHAF DYALCNSFGF GGTNGSLLFK RGE
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