| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1600 |
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| Symbol | |
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| ID | 4921955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1832459 |
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| End bp | 1833487 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163162 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_001093726 |
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| Protein GI | 127512529 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000017306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00113836 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAATC TGACGCTTGC GTTAGATGCG ATGGGGGGCG ACTTTGGCCC CCGCATCACA
GTGCCTGCAA CCCTGCAGGC ACTTCGCTTA TATCCCTTCT TACACGTCAT CATGGTGGGT
GACAGGTCGC AAATCGAACC TCTGCTAAGC CACCTTGAAT CTGATTTACT CTCGCGTATT
GAACTCGTGC ACACCACAGA AGTGGTGAAG ATGTGCGATC GCCCCGTGCA TGCGCTGCGC
AACTGCAAGC AAAGTTCTAT GCGTCTGGCG ATCGAGCTGG TACGAGACAA GAAGGCTCAG
GCCTGTTTAA GCGCGGGTAA TACCGGGGCC CTGATGGCCA TCTCCAAGGT GTTGCTCAAG
ACGCTTCCCG GCATAGATAG ACCCGCCCTA GTTAGCTGCT TACCCGCGGT CAATCATAAA
CCCGTGTATC TGCTGGATCT CGGTGCCAAC GTCTCCTGCT GCTCGGAAAC CCTGTTTCAG
TTTGCGGTGA TGGGCTCGGT TCTGTGCGAG GCCGTGGATA AGAATCCTGC CCCTAAGGTG
GCCCTGCTTA ACGTGGGCAT CGAAGAGATC AAGGGTAACG ATCAGGTACA GCAGGCGGGA
CAATTACTGC AACAGAGCCC GCAGCTCAAT TACGCCGGAT TTATCGAAGG CGATGATATC
TATTCGGGTA ATGTCGACGT CATCGTCTGT GACGGTTTTG TTGGCAACAT TACCCTGAAA
ACCTCAGAGG GGATAGCAAG GCTCCTCGTC CATCAGTTGA AGAAAGGCTT AACTCAAGGC
TTTTTCGTAC GATTACTGGC CAAGTTAATC GCCCCGCGCA TTAATAGTGT TTTAAATCAG
ATGAACCCCG ACCACTATAA CGGAGCAAGT CTGATAGGAT TGCGCGGAAT TGTAGTAAAA
AGTCATGGAA GTGCGGATGA ATCTGCCTAT TTACAAGCAA TTAGTTTGGC AGTGACCGAA
GCACAACGTC GACTCCCCAA GATGATCGAA GAGCGTCTTG AGTCGATCCT TTTAGACATA
AATAACTGA
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| Protein sequence | MTNLTLALDA MGGDFGPRIT VPATLQALRL YPFLHVIMVG DRSQIEPLLS HLESDLLSRI
ELVHTTEVVK MCDRPVHALR NCKQSSMRLA IELVRDKKAQ ACLSAGNTGA LMAISKVLLK
TLPGIDRPAL VSCLPAVNHK PVYLLDLGAN VSCCSETLFQ FAVMGSVLCE AVDKNPAPKV
ALLNVGIEEI KGNDQVQQAG QLLQQSPQLN YAGFIEGDDI YSGNVDVIVC DGFVGNITLK
TSEGIARLLV HQLKKGLTQG FFVRLLAKLI APRINSVLNQ MNPDHYNGAS LIGLRGIVVK
SHGSADESAY LQAISLAVTE AQRRLPKMIE ERLESILLDI NN
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