| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1599 |
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| Symbol | rpmF |
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| ID | 4923397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1832274 |
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| End bp | 1832444 |
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| Gene Length | 171 bp |
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| Protein Length | 56 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640163161 |
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| Product | 50S ribosomal protein L32 |
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| Protein accession | YP_001093725 |
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| Protein GI | 127512528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0333] Ribosomal protein L32 |
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| TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000342659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00352794 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTGTAC AACAGAATAA AAAATCTCGT TCAAAGCGCG GTATGCGCCG TTCACACGAC
GCGTTGAGCA CTGCTCAACT GTCAGTTGAT GCAACGAGTG GTGAACTGCA CCGTCGTCAC
AACGTGACTG CAGACGGTTA CTACCGTGGT CAAAAGGTTA TCAACAAGTA A
|
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| Protein sequence | MAVQQNKKSR SKRGMRRSHD ALSTAQLSVD ATSGELHRRH NVTADGYYRG QKVINK
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