Gene Shew_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1590 
Symbol 
ID4923297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1819603 
End bp1820442 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content52% 
IMG OID640163152 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001093716 
Protein GI127512519 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.253534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG AAACAATAGA TTACCGTGCT CAGGACAGCG CCCAGCGCTT CGTTGAGTCC 
TTGCGTGAAA CTGGATTTGG CGTACTCTCA AATCACCCAA TCGACAAGGC CTTAGTAGAT
ACCATCTATG AAGAGTGGCA AGCCTTCTTC AATAGCGATG AGAAACATGA CTACCTATTT
AAGCCAGAAA CCCACGACGG TTTCTTCCCG GCCGATGTTT CTGAAACCGC TAAGGGTCAT
ACGGTTAAAG ACATTAAAGA GTATTACCAT GTTTACCCAT GGGGCCGTAT CCCCGATTCC
CTCAGGGAAA ACATTCTGCG CTATTACCAG GAAGCTAATG CATTGGCAGA AGAGCTGTTA
GGTTGGGTGG AAGCTCATAC ACCGGCAGAA GTGGCGGTCA ATTACTCTAT CGCCCTGCCT
AAGATGATCG AGAACAGCCA CAAGACGCTG CTGCGTATCC TTCACTATCC ACCGATGTCG
GGTGACGAAG AGCTAGGCGC CATTCGCGCC GCGGCTCACG AAGATATCAA CCTGCTTACC
GTGTTGCCGG CCGCTAACGA GCCCGGCCTG CAGGTAAAAG CCAAATCGGG CGAATGGTTA
GACGTACCGA GCGATTTCGG TAACCTGATC ATCAACATAG GTGACATGCT CCAAGAAGCA
TCGGGCGGCT ACTTCCCATC GACGACCCAC AGGGTGGTCA ACCCAGAAGG CGCCGACAAA
ACACGCTCGC GCATCTCCCT GCCCCTCTTC CTACATCCTA AGCCAGAGGT GGTCCTGTCA
GAGCGTTACA CCGCCGACAG CTATCTGATG GAGCGTCTGA GAGAATTAGG CGTTATCTAA
 
Protein sequence
MKLETIDYRA QDSAQRFVES LRETGFGVLS NHPIDKALVD TIYEEWQAFF NSDEKHDYLF 
KPETHDGFFP ADVSETAKGH TVKDIKEYYH VYPWGRIPDS LRENILRYYQ EANALAEELL
GWVEAHTPAE VAVNYSIALP KMIENSHKTL LRILHYPPMS GDEELGAIRA AAHEDINLLT
VLPAANEPGL QVKAKSGEWL DVPSDFGNLI INIGDMLQEA SGGYFPSTTH RVVNPEGADK
TRSRISLPLF LHPKPEVVLS ERYTADSYLM ERLRELGVI