Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1590 |
Symbol | |
ID | 4923297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1819603 |
End bp | 1820442 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163152 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | YP_001093716 |
Protein GI | 127512519 |
COG category | [R] General function prediction only |
COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.253534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAG AAACAATAGA TTACCGTGCT CAGGACAGCG CCCAGCGCTT CGTTGAGTCC TTGCGTGAAA CTGGATTTGG CGTACTCTCA AATCACCCAA TCGACAAGGC CTTAGTAGAT ACCATCTATG AAGAGTGGCA AGCCTTCTTC AATAGCGATG AGAAACATGA CTACCTATTT AAGCCAGAAA CCCACGACGG TTTCTTCCCG GCCGATGTTT CTGAAACCGC TAAGGGTCAT ACGGTTAAAG ACATTAAAGA GTATTACCAT GTTTACCCAT GGGGCCGTAT CCCCGATTCC CTCAGGGAAA ACATTCTGCG CTATTACCAG GAAGCTAATG CATTGGCAGA AGAGCTGTTA GGTTGGGTGG AAGCTCATAC ACCGGCAGAA GTGGCGGTCA ATTACTCTAT CGCCCTGCCT AAGATGATCG AGAACAGCCA CAAGACGCTG CTGCGTATCC TTCACTATCC ACCGATGTCG GGTGACGAAG AGCTAGGCGC CATTCGCGCC GCGGCTCACG AAGATATCAA CCTGCTTACC GTGTTGCCGG CCGCTAACGA GCCCGGCCTG CAGGTAAAAG CCAAATCGGG CGAATGGTTA GACGTACCGA GCGATTTCGG TAACCTGATC ATCAACATAG GTGACATGCT CCAAGAAGCA TCGGGCGGCT ACTTCCCATC GACGACCCAC AGGGTGGTCA ACCCAGAAGG CGCCGACAAA ACACGCTCGC GCATCTCCCT GCCCCTCTTC CTACATCCTA AGCCAGAGGT GGTCCTGTCA GAGCGTTACA CCGCCGACAG CTATCTGATG GAGCGTCTGA GAGAATTAGG CGTTATCTAA
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Protein sequence | MKLETIDYRA QDSAQRFVES LRETGFGVLS NHPIDKALVD TIYEEWQAFF NSDEKHDYLF KPETHDGFFP ADVSETAKGH TVKDIKEYYH VYPWGRIPDS LRENILRYYQ EANALAEELL GWVEAHTPAE VAVNYSIALP KMIENSHKTL LRILHYPPMS GDEELGAIRA AAHEDINLLT VLPAANEPGL QVKAKSGEWL DVPSDFGNLI INIGDMLQEA SGGYFPSTTH RVVNPEGADK TRSRISLPLF LHPKPEVVLS ERYTADSYLM ERLRELGVI
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