| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1582 |
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| Symbol | |
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| ID | 4923710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1811190 |
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| End bp | 1811978 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163144 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001093708 |
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| Protein GI | 127512511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.696135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.554406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTATCG ATTCCCATTG CCATCTCGAT CGCCTTAAGG CGGCGCCCGA TCAAGATTCA
TTGAAGACCT TGCTGACTCA AGCCAAGGAG CGCGGCGTGG AGTATTTCCT GTGCGTCAAT
GTGCGCCAGC AAGGTTTTGC CTCTATGCAG GCGAAAATGG CAGCCTTCGA CCAGGTGTTC
CTGTCGGCGG GCGTACATCC GCTGGATGTG CAGGAGGGGC TGGATACGGC GCAGCTGCAA
AGCTATCTGC AAGATCCTAA GGTGGTCGCC ATCGGTGAGA CAGGCCTGGA TTATTACTAT
TCGGGCGAGA CCAAGACGCT ACAACAGCAA TGTTTCGAGC AGCAGATCGC CCTGGCGGTC
GAGGTAGATA AGCCGTTGAT CGTCCACACC CGTGATGCCC GTGAAGATAC CATCGCCATG
TTGAAAGCAG GTAACGCGGA CAAGGTGGGC GGTGTGCTGC ACTGCTTCAC CGAGAATTGG
GAGATGGCCA AGGCCGCCAT CGATCTGGGC TTCTATATCT CAGTCTCTGG CATAGTGACC
TTTAAGAATG CCGGTGAGCT GCGCTCTGTG ATCCGCAAGG TGCCAAAGGA CAGACTCCTG
GTGGAAACCG ATGCGCCGTA TCTTGCGCCC GTGCCTCATC GCGGCGAAGA GAACCAACCT
GCGTTTGTTC GGGATGTGGC GGAGTTTGTA GCTGAGCTGC GCGGCGAGAA GTATGAAGAA
CTGGCAGAGT ATTCCGGCGA TAACTTCTTC AGGCTGTTCA AAGACGCGGC TAAGTTAGTG
AAAGCCTAG
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| Protein sequence | MLIDSHCHLD RLKAAPDQDS LKTLLTQAKE RGVEYFLCVN VRQQGFASMQ AKMAAFDQVF
LSAGVHPLDV QEGLDTAQLQ SYLQDPKVVA IGETGLDYYY SGETKTLQQQ CFEQQIALAV
EVDKPLIVHT RDAREDTIAM LKAGNADKVG GVLHCFTENW EMAKAAIDLG FYISVSGIVT
FKNAGELRSV IRKVPKDRLL VETDAPYLAP VPHRGEENQP AFVRDVAEFV AELRGEKYEE
LAEYSGDNFF RLFKDAAKLV KA
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