| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1575 |
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| Symbol | |
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| ID | 4924405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1806167 |
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| End bp | 1806802 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163137 |
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| Product | uridine kinase |
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| Protein accession | YP_001093701 |
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| Protein GI | 127512504 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0572] Uridine kinase |
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| TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGC AATGTGTCAT AATTGGTATC GCAGGGGCAT CGGCATCGGG TAAGAGCCTA
ATCGCGAAGA CGATTTTCGA GGAGCTATGC CGTGATCTGG GCACAGATCA GATAGGGGTT
ATCGCCGAGG ATGCCTACTA TAAGGATCAG GGCCATCTGT CGATGGACCA GCGTGTCCTA
ACCAATTACG ATCACCCAAA GGCGCTGGAT CATCAGCTGC TGTGTGAACA CCTTAGCGCC
CTGAAAAATG GCGAGGCGGT GGAGATCCCT CAATACAGCT ATACCGAGCA TACCCGTATG
GCCGAGACAG TGACCATGAC ACCTAAGAAG GTGATCATCC TCGAGGGGAT CTTGCTACTG
ACAGATCCTA ACCTGCGCGA GCAGATGGAT GCCAGCGTCT TCATGGACAC GCCACTGGAC
ATCTGTTTCA TGCGCCGCCT GACCCGCGAT GTGGCCGAGC GTGGCCGTAC CATGGAGTCT
GTGATGCAGC AGTACACTCA GACAGTGCGT CCAATGTTCC TGCAATTTAT CGATCCTTCT
AAGCAATATG CCGATATTAT CGTGCCGCGT GGTGGTAAAA ACCGCATCGC AACCGATATA
TTAAAGGCTA GAATTCAACA CCTTTTAGCA AAATAA
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| Protein sequence | MNSQCVIIGI AGASASGKSL IAKTIFEELC RDLGTDQIGV IAEDAYYKDQ GHLSMDQRVL
TNYDHPKALD HQLLCEHLSA LKNGEAVEIP QYSYTEHTRM AETVTMTPKK VIILEGILLL
TDPNLREQMD ASVFMDTPLD ICFMRRLTRD VAERGRTMES VMQQYTQTVR PMFLQFIDPS
KQYADIIVPR GGKNRIATDI LKARIQHLLA K
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