| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1573 |
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| Symbol | metG |
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| ID | 4924354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1802861 |
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| End bp | 1804882 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163135 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001093699 |
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| Protein GI | 127512502 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0544859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTT CACAACGTAA AATTCTCGTG ACCAGCGCAC TTCCGTACGC CAATGGCCCC
ATTCATTTAG GTCACATGCT TGAATATATT CAAACCGATA TCTGGGCGCG TTTTCAAAAG
CTACGCGGCC ACGAATGTCA CTATATCTGT GCAGACGATG CCCACGGCAC GCCCATCATG
CTTAAGGCGC AGCAGCTCAG CATGGCGCCA GAGGAGATGA TCGCTCAGGT ACAGAAAGAG
CATCAGCAGG ATTTTGCCGA CTTTAATATT CAGTTCGATA ATTTCCACAG CACCCACAGC
GACGAAAACC GTGAGCTGGC GAGCGAGATC TACCTCAAAC TTCGCGATGG CGGCTATATC
AAGTCAAAGA CCATCTCTCA GCTGTTCGAT CCTGAAAAGT CTATGTTCCT GCCGGATCGC
TTCGTTAAGG GCACCTGCCC CAAGTGTAAG TCTGTGGATC AATATGGCGA CAACTGTGAC
AGCTGCGGCG CGACCTACAG CCCAACGGAT CTAATCGATC CTAAATCGGC AGTATCGGGT
GCCACACCTG TGATGAAGGA GACTGAGCAC TTCTTCTTCG ACCTACCCGC CTTCGAAGAT
ATGTTGAAAG AGTGGACCCG TTCAGGTTCG CTACAACAAG AGATGGCCAA CAAGCTGGGC
GAGTGGTTCG AACAGGGCCT GCAGCAGTGG GACATTACCC GTGATGCGCC TTACTTCGGC
TTCGAGATCC CTGATGCACC GGGTAAATTC TTCTACGTCT GGCTAGATGC GCCTATCGGC
TACATGGGCT CGTTCAAGAA CCTGTGCAAC AAGCGCAGCG ACCTTAACTT CGACGAGTTC
TGGGCAAAAG ACTCAACCGC CGAGGTATAC CACTTCATCG GTAAAGATAT CGTCTACTTC
CACAGCCTGT TCTGGCCTGC CATGCTAGAA GGCGCGGGAT TCCGTAAGCC AAACAGCGTC
TACGCCCACG GCTATGTGAC GGTGAACGGC GCCAAGATGT CAAAGTCTAA AGGCACCTTC
ATCAAGGCCA GAACCTATCT GGATAACTTA AATCCTGAGT ACCTGCGTTA CTACTATGCG
GCTAAGCTCA GCAGCCGTAT CGACGATCTC GACCTTAACC TGGAAGACTT CGCCCAGCGC
GTCAACTCAG ATCTCGTGGG TAAGCTGGTT AACCTCGCCT CTCGCACCGC AGGCTTTATC
AGCAAGCGTT TCGACGGCAA GCTGGCCAAG GTTGCCGACG CTAGCCTGAC TGAAACTTTC
CTCGCCAAGG CAGATGCCAT CGCCGAGTTT TACGAGACCC GTGAATTTGG TAAGGCGATG
CGTGAGATCA TGGCCCTCGC CGATATCGCC AACGCCTTTG TCGCCGATGC GGCCCCATGG
CAGCTGGTGA AAGAGGAAGA TAAGCAAGAG GAAGCCCACC AGGTATGTAG CAACGCGCTG
AACCTGTTCC GCATCCTGGT GACCTACCTC AAGCCTGTGC TGCCAAAACT GGCCCAGGAT
GTGGAGGCCT TCCTACAACT TGAGCTGACC TGGGATGACC TGGCAAAAGA TCTCAGCGGT
CACGAAATCG CGCCGTTCAA GGCACTGATG CAACGTGTCG AGATGAAGAA CATCGAAGCC
ATTATCGAAG CCTCGACCGA GAACCTGCAG GTAGCCGAGG CGCCTAAGAG CCAGCTGGAT
CTCGATCCTA TCAGCGAAGA GATCAGCTTC GACGACTTCG CCAAGTTAGA TCTGCGTATC
GCCCGTATCG CCAAGGCGGA ACATGTGCCT GATGCCAACA AGCTGCTTAA GCTGCAGCTG
GACCTAGGTG GCGAGACTAA GCAGGTGTTT GCCGGCATCA AGTCTGCCTA TGCCCCAGAA
GATCTGGAAG GCAAGCTGAC CGTAATGGTC GCTAACCTGG CACCGCGTAA GATGCGTTTC
GGCATGTCTG AAGGCATGGT GCTTGCGGCC GGTCCTGGTA AAAAAGATCT GTGGATCCTG
GAGCCACATG AAGGTGCCCA ACCTGGCATG CGCGTGAAAT AA
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| Protein sequence | MATSQRKILV TSALPYANGP IHLGHMLEYI QTDIWARFQK LRGHECHYIC ADDAHGTPIM
LKAQQLSMAP EEMIAQVQKE HQQDFADFNI QFDNFHSTHS DENRELASEI YLKLRDGGYI
KSKTISQLFD PEKSMFLPDR FVKGTCPKCK SVDQYGDNCD SCGATYSPTD LIDPKSAVSG
ATPVMKETEH FFFDLPAFED MLKEWTRSGS LQQEMANKLG EWFEQGLQQW DITRDAPYFG
FEIPDAPGKF FYVWLDAPIG YMGSFKNLCN KRSDLNFDEF WAKDSTAEVY HFIGKDIVYF
HSLFWPAMLE GAGFRKPNSV YAHGYVTVNG AKMSKSKGTF IKARTYLDNL NPEYLRYYYA
AKLSSRIDDL DLNLEDFAQR VNSDLVGKLV NLASRTAGFI SKRFDGKLAK VADASLTETF
LAKADAIAEF YETREFGKAM REIMALADIA NAFVADAAPW QLVKEEDKQE EAHQVCSNAL
NLFRILVTYL KPVLPKLAQD VEAFLQLELT WDDLAKDLSG HEIAPFKALM QRVEMKNIEA
IIEASTENLQ VAEAPKSQLD LDPISEEISF DDFAKLDLRI ARIAKAEHVP DANKLLKLQL
DLGGETKQVF AGIKSAYAPE DLEGKLTVMV ANLAPRKMRF GMSEGMVLAA GPGKKDLWIL
EPHEGAQPGM RVK
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