| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1572 |
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| Symbol | |
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| ID | 4924348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1802005 |
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| End bp | 1802757 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163134 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093698 |
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| Protein GI | 127512501 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000308577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCGCA CAGCATTGAC TCGATACCTC ACGGAATTTC TGCAGGTAGG CAGCTACAAG
GATTATGCCC CCAATGGGTT ACAGGTCGAG GGCAAGGAGC GAATTAAGAC GATTGTCACC
GGAGTGACCG CCTGTCAGGC ATTGATCGAC AAGGCGGTTG AGCTAAACGC CGATGCCTTG
CTGGTGCATC ATGGCTTCTT CTGGAAGGGT GAGCCTGAGA CCATCACCGG GATGAAGTAT
CGTCGCATCA AGTCATTGAT CAATAATGAT ATCAACCTCT ATGGTTATCA TCTGCCGCTC
GACGGTCATC CTATGCTGGG GAACAACGCC GAGTTGGCTA GAGAGCTTGG GATCATAGAT
GCCGAGTCGG TGGAGGGGGT TGCCCAGGGG CTGGTGTGGC AGGGGCGTCT CGATGAGCCT
ATGGCGCCGA GTGCGTTTGC CGAACATCTT GCGAGTGTTC TTGGCCGTCA GGCCTTGCAC
CTGGGAGAGA GCGATAAGCC GATTCATCGC CTGGCCTGGT GTAGCGGCGG GGCGCAAGAC
TACATAGATA TCGCCGTAGA TTTGGGCGTC GATGCCTTTA TCAGTGGCGA GGTGTCTGAG
CGTACCTTCC ATAGCGCGGT CGAGCAGGAT ATTCACTACT TTGCCGCGGG TCATCACGCC
ACGGAAAGAT TCGGTATCAA GGCATTGGGC GAGCACCTGG CCAATGAGTT TGGTTTGACT
CACCATTTTG TGGATATCGA CAATCCGGTG TAA
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| Protein sequence | MNRTALTRYL TEFLQVGSYK DYAPNGLQVE GKERIKTIVT GVTACQALID KAVELNADAL
LVHHGFFWKG EPETITGMKY RRIKSLINND INLYGYHLPL DGHPMLGNNA ELARELGIID
AESVEGVAQG LVWQGRLDEP MAPSAFAEHL ASVLGRQALH LGESDKPIHR LAWCSGGAQD
YIDIAVDLGV DAFISGEVSE RTFHSAVEQD IHYFAAGHHA TERFGIKALG EHLANEFGLT
HHFVDIDNPV
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