| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1555 |
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| Symbol | |
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| ID | 4922892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1785277 |
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| End bp | 1786308 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163117 |
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| Product | Glu/Leu/Phe/Val dehydrogenase, dimerisation region |
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| Protein accession | YP_001093681 |
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| Protein GI | 127512484 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.331273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGTAT TTAATCATAT CTCATTTGAT GACCACGAAC AGGTCGTATT TTGTCATGAT
AAAGAAAGTG GCTTACGTGC AATCATAGCC ATTCACAACA CCAACCTGGG CCCAGCGGTC
GGCGGTTGCA GAATGTGGAA CTATGAGTCT GATGACGAAG CACTGACCGA CGTATTACGT
CTGTCTCGTG GCATGACCTA CAAGAACGCC CTAGCCGGTC TGGCAATGGG TGGCGGTAAG
TCGGTGATCA TCGCCGATCC TAAAGTAGAA AACCGTGAAG CCCTGTTCCG CGCCTTCGGT
CGTTGTATTC ATACTCTGGG TGGTAAGTAC TACTCTGCAG AAGATGTGGG CGTGTCTACC
AGCGACATCA TGATTGCTCA CCAAGAAACC CCATACATGG CGGGTCTTGA AGGTCAGAGC
GGTGACCCAT CACCATTTAC TGCGCTTGGC ACCTACTTGG GTATCAAGGC TGCCGTTAAG
CATCAGCGTG GCCTGGACAG CCTCAAGGGC CTTAAGATTG CCGTTCAGGG CGTTGGCCAC
GTAGGTTACT ACCTGTGTCG TCACCTGCAC GAAGAAGGCG CCGAGCTGAT CGTCACCGAC
ATTCACCAGT CATCACTGGA TAAGGTCGCT ACCGAGTTTG GTGCTACTGT GGTTGCGCCT
CAAGATATCT ACCATCAAGA TGTCGATATC TATGCACCAT GTGCCCTGGG TGCCACCATC
AACGACACCA CGATTCCACT GCTGAAGGCT AAGATTGTGG CAGGTTGTGC CAACAACCAG
CTTGCCGAAC TGCGCCATGG CGAGAAGCTC AAAGAACTGG GCATCCTGTA CGCGCCAGAC
TATGTGATCA ACGCCGGCGG TATCATCAAC GTCTCGTTCG AAAAAGATTA CGACGCACAA
AAATCTACCG CCAAGGTAGA AGAGATCTAC AACACCCTGC TGAAGATCTT CGAACAGTCT
GATGCGCAAA ACCGCACCAC AGCGGATGTT GCCGACGAAC TGGCACGCGC CATCATCAAC
GGCGAAAAAT AA
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| Protein sequence | MAVFNHISFD DHEQVVFCHD KESGLRAIIA IHNTNLGPAV GGCRMWNYES DDEALTDVLR
LSRGMTYKNA LAGLAMGGGK SVIIADPKVE NREALFRAFG RCIHTLGGKY YSAEDVGVST
SDIMIAHQET PYMAGLEGQS GDPSPFTALG TYLGIKAAVK HQRGLDSLKG LKIAVQGVGH
VGYYLCRHLH EEGAELIVTD IHQSSLDKVA TEFGATVVAP QDIYHQDVDI YAPCALGATI
NDTTIPLLKA KIVAGCANNQ LAELRHGEKL KELGILYAPD YVINAGGIIN VSFEKDYDAQ
KSTAKVEEIY NTLLKIFEQS DAQNRTTADV ADELARAIIN GEK
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