| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1540 |
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| Symbol | |
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| ID | 4922268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1768212 |
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| End bp | 1769342 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163102 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001093666 |
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| Protein GI | 127512469 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.47275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA AGTTTATTAA ATCTAAGGCC GCCATCGCCT GGGGACCGGG CCAGCCATTA
TCGGTAGAAG AGGTGGATGT GATGTATCCC AAGGCCGGTG AGGTGTTGGT GAAGATAGTC
GCAACCGGTG TCTGCCATAC CGATGCCTTT ACCCTCTCGG GTGACGATCC TGAAGGTGTC
TTTCCGGCGA TCCTGGGCCA CGAAGGCGGC GGTATCGTCG AGGCGGTCGG TGAAGGTGTC
ACCAGTGTGG CGGTAGGGGA TCACGTGATC CCGCTTTATA CCCCTGAGTG CGGCGAGTGT
AAGTTCTGTA AGTCGGGTAA GACTAACCTG TGTCAGAAGA TCCGCGAGAC TCAAGGCAAA
GGCTTGATGC CAGATGGCAC CACGCGTTTC TTCAAAGATG GTCAGCCTAT CTTCCATTAC
ATGGGCTGCT CAACTTTCTC AGAATATACC GTACTACCAG AGATCTCATT GGCCAAGGTT
AATCCCGAGG CGCCACTGGA AGAGGTGTGT CTGCTAGGTT GCGGTGTGAC CACTGGCATG
GGCGCGGTAC TCAACACGGC TAAGGTTGAG CCGGGGGCGA GCGTCGCCAT CTTCGGGATC
GGTGGCATAG GCCTGTCGGC CATCATTGGT GCGACTATGG CGGGCGCTAG CCGCATCATC
GCCATCGATA TCAACGAGAG CAAGTTTGAG CTGGCCCGTC AGCTAGGGGC AACCGATTGC
ATCAACCCCA AAAACTATGA CAAGCCTATC CAGGAAGTGA TTGTTGAACT GACCGATGGC
GGCGTGGATT ACTCCTTCGA GTGTATCGGT AATGTGGATG TGATGCGCTC GGCGCTGGAG
TGCTGCCATA AGGGGTGGGG CGAATCTGTG ATTATCGGTG TCGCAGGCGC CGGCCAGGAG
ATCTCGACCC GTCCATTCCA GCTGGTGACC GGACGCGTCT GGCGCGGCAG TGCCTTCGGC
GGCGTGAAGG GACGCTCGGA GCTGCCTGAG ATCGTTGAGA AGTACCTGCG CGGCGAGTTT
AAGCTTAGCG ACTTTATCAC TCACACCATG GCGCTGGAGG AGATCAACAC AGCCTTCGAC
CTCATGCATG AGGGTAAGAG TATCCGCTCT GTGGTGCACT TTAACCGATA G
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| Protein sequence | MTDKFIKSKA AIAWGPGQPL SVEEVDVMYP KAGEVLVKIV ATGVCHTDAF TLSGDDPEGV
FPAILGHEGG GIVEAVGEGV TSVAVGDHVI PLYTPECGEC KFCKSGKTNL CQKIRETQGK
GLMPDGTTRF FKDGQPIFHY MGCSTFSEYT VLPEISLAKV NPEAPLEEVC LLGCGVTTGM
GAVLNTAKVE PGASVAIFGI GGIGLSAIIG ATMAGASRII AIDINESKFE LARQLGATDC
INPKNYDKPI QEVIVELTDG GVDYSFECIG NVDVMRSALE CCHKGWGESV IIGVAGAGQE
ISTRPFQLVT GRVWRGSAFG GVKGRSELPE IVEKYLRGEF KLSDFITHTM ALEEINTAFD
LMHEGKSIRS VVHFNR
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