| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1538 |
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| Symbol | |
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| ID | 4921537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1766794 |
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| End bp | 1767039 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640163100 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093664 |
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| Protein GI | 127512467 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2841] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0059018 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAGGTG AAAACCACTC GCTCATTAAC GACTTTCCTG ATTATCAAGA CCTGATCCTC
AAACTCACCG AATCCGATGA TGGATTCGCG CAAGACAACA AGAAGTACAG TTCGTTAGAC
AAAGAGATCC GAACCTTAGA GCTTAACGAT GCGCCTATCG ACGATAGCGC CATGCATCAG
CTTAAGCACG ATAGAGCCGA GCTGAAAGAC GCCCTCTATC AACGTCTGCT CGACGCCAGT
AACTGA
|
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| Protein sequence | MLGENHSLIN DFPDYQDLIL KLTESDDGFA QDNKKYSSLD KEIRTLELND APIDDSAMHQ
LKHDRAELKD ALYQRLLDAS N
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