| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1533 |
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| Symbol | |
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| ID | 4921702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1758093 |
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| End bp | 1760045 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163095 |
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| Product | acetyl-CoA synthetase |
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| Protein accession | YP_001093659 |
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| Protein GI | 127512462 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC AGTCTCTCTA CAAAGTTCCA AGCGAAATCG CGGCGAATGC CCATATTAAT
GACGAGAAAT ATAAGAAGAT GTATCAGGAA TCTGTGGTTA ATCCCGAAGG TTTCTGGAGA
GAGCATGGCC AGCGCATCGA TTGGATGAAG CCTTTTACTA AGGTCAAGAA AACCTCCTTC
GACGATCATA ACCTGTCGAT CAACTGGTTC TATGACGGCA CCCTTAACGC CTCGGTTAAC
TGTCTCGACA GACACCTGGC CGACAACGCC GATAAGCTAG CCATCATCTG GGAAGGTGAT
GACGCGGCCG ATCAACGCAC CCTCACCTAT GGTGAACTCC ATACAGAGGT GTGTAAGTTT
GCCAACGCCC TGCGCAGCCA AGGCGTGCGT CGTGGTGACG TGGTCACGGT TTACATGCCA
ATGGTGCCCG AAGCCGCCGT GGTCATGCTG GCATGTGCCC GCATTGGCGC CATCCACTCT
GTGGTGTTCG GTGGCTTCTC GCCTGACTCT ATCGCCTCAC GAGTGATCGA CGGCAAGTCC
AAGGTCGTGA TCACCGCCGA CGAAGGCGTG CGCGGTGGCC GCACTATCCC ACTAAAAGCC
AACATAGATG AGGCCTTGTC TCACCCAGAC GTGACCTGTG TCGAGAAGGT GATCGTGCTT
GAGCGTACCG GCAACCCCGT CAATTGGGTT GAGGGACGCG ACATCAAGTG GGCGTCACTA
ATGGAAACCG CCTCAGAGCA CTGCGTGGCC GAAGAGATGG GCGCCGAAGA TCCCCTCTTC
CTGCTCTATA CATCTGGCTC TACCGGTAAC CCTAAGGGCG TGCTGCACAC CACGGGGGGG
TACCTGGTCT ATGCCTCGAT GACCCACGAA TATGTGTTTG ACTACAAAGA GGGTGAGATC
TACTGGTGTA CCGCCGACGT GGGTTGGATC ACCGGTCACT CCTACATGGT CTATGGCCCG
CTGGCTAACG GCGCGACCAT ATTGATCCAC GAAGGTATCC CTAACTACCC AACGCCAGCC
CGTCTGGGTG AGATGATCGA CCGCCATAAG GTCAACATCC TCTACACGGC GCCGACGTTG
ATCCGTGCTC TAATGGCAGA AGGCAAGGAG CAGTTCGATG GCTTCGATGG CAGCTCGCTG
CGCATCATGG GCTCTGTGGG TGAACCTATT AACCCAGAGG CCTGGCGCTG GTATCACGAG
GTGATCGGCC ATGAGAACTG CCCTATCGTC GATACCTGGT GGCAAACCGA AACCGGTGGC
ATCTTGATCT CGCCACTGCC GGGCGCCACT GATACTAAGC CAGGTTCTGC CACACGCCCC
TTCTTCGGCG TGCAGCCAGC CCTGGTGGAC AACATGGGCA ACATCATAGA TGGCGCAGCC
GAGGGTAACC TGGTGATCCT CGACTCCTGG CCAGGACAGA TGCGCACCGT ATACGGTGAC
CACGACAGAT TCGCGCTGAC CTACTTCAAG ACCTTCCGTG GCATGTACTT TACTGGTGAC
GGTGCTCGCC GCGATGAAGA TGGCTACTAC TGGATCACTG GCCGAGTCGA TGACGTGATT
AACGTATCGG GCCACCGCCT GGGTACCGCC GAGGTCGAGA GCGCCCTGGT GGCTCACGAG
CATGTCGCCG AGGCCGCCGT GGTGGGCTAC CCTCACGACA TCAAGGGCCA AGGAATCTAT
GCCTATGTCA CCCTGACCAA GGGCACTCAG GAGAGCGAAG AGCTGCGCCA GGAGCTGCGT
CAATGGGTCA GAAAAGAGAT TGGTGCCCTG GCGACGCCGG ATCTGATCCA GTGGGCCGGC
GGTCTGCCTA AGACACGTTC GGGTAAGATC ATGCGCCGCT TCCTGCGTAA GATCGCCGCC
AACGAAGTGA CCAACTTAGG TGATGCGTCA ACTCTCGCTG ATCCAGCGGT GATCGACACC
CTGATTGAGA CGCGTCTCAA CCGCAGCGAA TAA
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| Protein sequence | MSTQSLYKVP SEIAANAHIN DEKYKKMYQE SVVNPEGFWR EHGQRIDWMK PFTKVKKTSF
DDHNLSINWF YDGTLNASVN CLDRHLADNA DKLAIIWEGD DAADQRTLTY GELHTEVCKF
ANALRSQGVR RGDVVTVYMP MVPEAAVVML ACARIGAIHS VVFGGFSPDS IASRVIDGKS
KVVITADEGV RGGRTIPLKA NIDEALSHPD VTCVEKVIVL ERTGNPVNWV EGRDIKWASL
METASEHCVA EEMGAEDPLF LLYTSGSTGN PKGVLHTTGG YLVYASMTHE YVFDYKEGEI
YWCTADVGWI TGHSYMVYGP LANGATILIH EGIPNYPTPA RLGEMIDRHK VNILYTAPTL
IRALMAEGKE QFDGFDGSSL RIMGSVGEPI NPEAWRWYHE VIGHENCPIV DTWWQTETGG
ILISPLPGAT DTKPGSATRP FFGVQPALVD NMGNIIDGAA EGNLVILDSW PGQMRTVYGD
HDRFALTYFK TFRGMYFTGD GARRDEDGYY WITGRVDDVI NVSGHRLGTA EVESALVAHE
HVAEAAVVGY PHDIKGQGIY AYVTLTKGTQ ESEELRQELR QWVRKEIGAL ATPDLIQWAG
GLPKTRSGKI MRRFLRKIAA NEVTNLGDAS TLADPAVIDT LIETRLNRSE
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