| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1530 |
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| Symbol | |
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| ID | 4921918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1754711 |
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| End bp | 1755853 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163092 |
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| Product | porin |
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| Protein accession | YP_001093656 |
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| Protein GI | 127512459 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.232384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.862821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAACG CAAAAGTGTC TTTGCTGGCT GCGGCGACCT TACTGGCGCT AGGTTCCAGT
GCCGCTATGG CCGAGACAGA GTTCAAGTTT GGTGGCTATG TAAAGGCCGA TGTCATGTTC
AGTGACTACA GCAATGGTGC ACCGGACTCA GGCAATCTTT CTCGCCAGTT TTATGTTCCA
GGTACCATTT ATGGTACGCC GGGCAATGGC AAACAAGTCG TAGATTTCCA AGCGAGAGAG
TCTCGCTTTA ATTTTAAGAC AACGACAGAT CTAGACGGTC ACAAGCTGAC TGGTTTTATC
GAGTTGGACT TCATGACCCA TACAGACGGC AACGAAAGGG TATCGAACAG TTACTCTCCA
CGTATTCGTC ATGCATTTGT GAGTTACGAC AACTGGACCG TGGGTCAGAC CTGGAGTACC
TTCATGAATC CAGGCTCCTT GCCTGAGAAC CTTGACTTTG TGGGTGCGGC CGACGGTACG
CCTTTCGTTC GCCAGACGCA GGTCAGATAC ACCAATGGCG GCTTCCAGTT TGCCTTGGAA
AATCCTGAAA CTACGGTAAC TCCTAATGGC GGTGGTTCAC GTATCACCAG CGGAAGCGGT
ATAGTGCCAG ATTTCGTGGC GCGTTATAAC TTCAAGACCC AAGGCGGTGC AAAGTTCACG
CTGGCTGGTA TTGCGCGTCA ACTTAACCTT GAGAAGAACG GTATAGATTC TCAGACCATG
GGCTATGGCG TGAACTTTAC CGGGGTGATC CCTGTTGGTG ATGATGATCT TAAACTATCG
GCGACTGCCG GTGATGGCTT AGGGCGTTAC ATGGCGCTTA ACTATGCCAA TGCCGGTGTG
TTAGACGCCT ATGGCGACAT CAAGACCATC AGCTCTTACG GCGGCTTTGC CTCTTATCGC
CATTGGTGGA ACGATAAATG GCGTTCAAGC TTTACCCTGT CAGGCTTCAA GGCGGATAAC
GATGTGGCCT TGACCGGTGG CGCGGTGAAC GAGGAGTCTT ACTCTGGCTA CATTAACCTG
CTCTATTCAC CTGTGAAGCC TATGACGGTT GGGGTGGAAT ATATGTATGC AGAGAACACC
AAACAAAATG GGGACAAGGG CGAGTTGAAT CGCGTGATGT TCTCGGTGAA ATATGTGCTC
TAG
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| Protein sequence | MKNAKVSLLA AATLLALGSS AAMAETEFKF GGYVKADVMF SDYSNGAPDS GNLSRQFYVP
GTIYGTPGNG KQVVDFQARE SRFNFKTTTD LDGHKLTGFI ELDFMTHTDG NERVSNSYSP
RIRHAFVSYD NWTVGQTWST FMNPGSLPEN LDFVGAADGT PFVRQTQVRY TNGGFQFALE
NPETTVTPNG GGSRITSGSG IVPDFVARYN FKTQGGAKFT LAGIARQLNL EKNGIDSQTM
GYGVNFTGVI PVGDDDLKLS ATAGDGLGRY MALNYANAGV LDAYGDIKTI SSYGGFASYR
HWWNDKWRSS FTLSGFKADN DVALTGGAVN EESYSGYINL LYSPVKPMTV GVEYMYAENT
KQNGDKGELN RVMFSVKYVL
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