| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1515 |
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| Symbol | |
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| ID | 4924043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1737706 |
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| End bp | 1739025 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163070 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001093641 |
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| Protein GI | 127512444 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2056] Predicted permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000563518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.487296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAG TTGTTATTGC CGTTTGCTTG ATGTTGGGCC TTAGCCTTGC CCGGGTAAAC
GTCGTTATCG CACTCACCGT GAGTGCATTG GTCGCCGGAC TCGTCGGCGG CATGAACCTA
GATCAGACGG TCGACGCCTT TAATACCGGC CTTGGCGGCG GCGCGCAGAT CGCCCTGAGC
TATGCCCTGT TGGGCGCCTT TGCCGTGGCC CTGTCACACT CGGGACTCAC CACGCTTATC
TCCCGCAAGG TGATCGCCCA GTTAGGACAA GAAGAAAGCC CTGGCAACGT CAACAAGGTG
CGCTGGTTCC TCTTGCTGGC TATCCTGGCC ATGGCGGTAT CGTCACAAAA CATTCTGCCG
ATTCATATTG CCTTCATTCC GATCTTAATT CCGCCGCTGT TGCATGTGAT GTCTAAGCTC
AAGCTCGACC GACGTCTGGT GGCCTGTGTG CTCACCTTCG GCCTAGTGAC CACCTATATG
ATCCTGCCCG TGGGTTTTGG TGGTATCTTC CTCAACGACA TCTTGCTCTC TAACCTCACC
AGCAACAACT TAGATGCGGT GCGCGAGCAG ATCCCATCGG CCATGTTAAT CCCGGCCCTA
GGCATGGTGG TGGGGCTATT CATCGCCGTA TTCATCAGCT ATCGCAAGCC AAGAGAGTAT
AAAGAAGAGT TGATCCTCGC CGCCGAGCCG GAGGAGACCC TCAATCGCCG TAACATCATC
ATCGCCCTGG TCGCTATTGC CTCTACCCTA GCGGTGCAGC TCTATACCGG CTCGATGATC
TTCGGCGCCC TCATCGGCTT TATCATCTTT AGCTTCTCTG GCGCCCTCAA GCATGTGGCC
GATCAGGATA TCTTTAACCA AGGCGTACGC ATGATGGCCA ACATAGGTTT CATCATGATC
TCGGCCGCCG GTTTCGCCGC CGTGGTCAAG GCCACAGGCG ACGTGGGCAC CCTGGTTGAT
TCCCTCAGCC ATCTCATCGG TGACAACCGC GCCTTGGCGG CCTTCTTGAT GTTGGTGGTC
GGGCTGCTCA TCACCATGGG AATCGGCTCA TCGTTTTCCA CCATCCCGAT TATTGCCACC
ATCTATGTGC CGCTGGCCAT CAGCTTCGGC TTCTCGGTAC CGGCCACCAT AGCGCTTGTC
GGCACGGCTG CGGCGCTGGG TGATGCGGGC TCACCGGCTT CGGATTCGAC CCTGGGCCCA
ACGGCCGGTC TTAACGCCGA CGGTCAGCAT GATCACATTC GTGACAGCGT GATCCCAACC
TTTATCCACT ACAACATCCC CTTGTTGATC TCGGGTTGGA TAGCGGCCAT GGTGCTTTAG
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| Protein sequence | MNAVVIAVCL MLGLSLARVN VVIALTVSAL VAGLVGGMNL DQTVDAFNTG LGGGAQIALS
YALLGAFAVA LSHSGLTTLI SRKVIAQLGQ EESPGNVNKV RWFLLLAILA MAVSSQNILP
IHIAFIPILI PPLLHVMSKL KLDRRLVACV LTFGLVTTYM ILPVGFGGIF LNDILLSNLT
SNNLDAVREQ IPSAMLIPAL GMVVGLFIAV FISYRKPREY KEELILAAEP EETLNRRNII
IALVAIASTL AVQLYTGSMI FGALIGFIIF SFSGALKHVA DQDIFNQGVR MMANIGFIMI
SAAGFAAVVK ATGDVGTLVD SLSHLIGDNR ALAAFLMLVV GLLITMGIGS SFSTIPIIAT
IYVPLAISFG FSVPATIALV GTAAALGDAG SPASDSTLGP TAGLNADGQH DHIRDSVIPT
FIHYNIPLLI SGWIAAMVL
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