| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1513 |
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| Symbol | |
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| ID | 4924075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1735736 |
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| End bp | 1736773 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163068 |
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| Product | phosphoribosylaminoimidazole synthetase |
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| Protein accession | YP_001093639 |
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| Protein GI | 127512442 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
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| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000222973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.483677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCACTC CTACCCAGCT AAGCTATAAA GATGCAGGTG TTGATATCGA CGCAGGCAAT
GCCCTTGTAG ACAATATTAA ATCTGCCGTT AAACGTACCC ACCGCCCCGA AGTTATGGGC
AACCTAGGTG GTTTTGGCGC ACTTTGCGAG CTGCCAACTA AGTACAAACA TCCAGTTCTT
GTGTCTGGCA CCGATGGTGT TGGTACCAAG CTTAGACTGG CTATCGATTA TCAGAAGCAT
GACAGCGTCG GCGTCGACCT GGTTGCCATG TGTGTCAACG ATCTGATTGT TGCCGGTGCA
GAGCCCCTGT TTTTCCTCGA CTATTACGCC ACTGGCAAGC TAGATGTTGC GACCGCGACC
TCTGTGGTTA ACGGTATCGC CGAAGGTTGT GCTCAATCAG GTTGCGCTCT AATCGGTGGT
GAAACCGCCG AAATGCCTGG CATGTACGAA GGCGAAGACT ACGACTTAGC TGGCTTCTGC
GTCGGCGTGG TCGAGAAAGA AGATGTGCTG GACGGTTCTA AAGTGGTTGC CGGTGACGCG
CTGATCGCCC TGGGCTCAAG CGGTCCACAC TCAAACGGTT ACTCGCTGAT CCGCAAGGTA
CTGGAAGTGA GCAAGGCCGA TCCTCAGCAA GACCTCGAAG GCAAGCCGCT TATCGATCAC
CTGCTGGAAC CGACCAAGAT TTATGTTAAG CCGCTGCTTA AGCTGCTTGA GAAGCATGAC
ATCCATGCCA TGGCGCATAT CACTGGCGGT GGCTTCTGGG AAAACATCCC ACGCGTGCTA
CCTAATGATG CTAAAGCCGT GGTAAAAGGC GACTCATGGC AATGGCCTAC CGTTTTCAAC
TGGTTGATGG AAAACGGTAA TATCGCCGAG TTTGAAATGT ACCGTACCTT CAACTGTGGT
GTTGGCATGA TCATCGCCCT ACCACAGGAT CAGGTCGATG CGGCGCTAAC CCTGCTTAAG
GCCGAAGGTG AAAACGCTTG GCTCATCGGT GACATTGCCA GCCGCAATGG CGACGAAGAG
CAAGTGGAGA TTTGCTAA
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| Protein sequence | MSTPTQLSYK DAGVDIDAGN ALVDNIKSAV KRTHRPEVMG NLGGFGALCE LPTKYKHPVL
VSGTDGVGTK LRLAIDYQKH DSVGVDLVAM CVNDLIVAGA EPLFFLDYYA TGKLDVATAT
SVVNGIAEGC AQSGCALIGG ETAEMPGMYE GEDYDLAGFC VGVVEKEDVL DGSKVVAGDA
LIALGSSGPH SNGYSLIRKV LEVSKADPQQ DLEGKPLIDH LLEPTKIYVK PLLKLLEKHD
IHAMAHITGG GFWENIPRVL PNDAKAVVKG DSWQWPTVFN WLMENGNIAE FEMYRTFNCG
VGMIIALPQD QVDAALTLLK AEGENAWLIG DIASRNGDEE QVEIC
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