| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1509 |
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| Symbol | asnB |
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| ID | 4920788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1730192 |
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| End bp | 1731850 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163064 |
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| Product | asparagine synthetase B |
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| Protein accession | YP_001093635 |
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| Protein GI | 127512438 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.894912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.973884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTCAA TATTTGCGAT TCTCGACATC CAAACCGATG CCACGCCGCT ACGCCAAGTT
GCCCTGGAGA TGTCCAAGTT GCTGCGTCAT CGCGGCCCCG ACTGGTCAGG GATCTACGCC
AGCGACAAGG CAATCCTCGC CCATGAGCGT CTGGCCATCG TCGATATCGA ACATGGCGCC
CAGCCACTGC TTTCAGAAGA TGAAAGCCTG ATCCTGGCGG TCAACGGTGA GATCTACAAC
CACAAGGAAC TCAAGGCCGA ACTGGGTGAC AAGTACAGTT ACCAGACCAA CTCAGACTGC
GAGGTGATCC TCGCCCTGTA TCAGGAATAT GGCACCGAAT TTCTGGACAA GCTCAACGGT
ATCTTCGCCT TCGTGCTCTA CGACAAGCGC AGCGACAGCT ATTTGATTGG TAGGGATCAC
ATGGGGATCA TCCCCCTCTA CACAGGCCAT GATGCCGAAG GCAACTTCTA TGTCGCCTCG
GAGATGAAGG CGCTGATGCC CGTCTGTAAG ACGGTCGAGA CCTTTAAGCC TGGCCACTAC
CTGACCAAGA GCGGTGAGAC CCACTACTAC CAGCGCGACT GGCAATCTTT CGAGGCGGTA
CAGGACAACG CGGCCAGCGT GGAAGAACTG CGCGAGGCAC TAGAAGCCGC GGTCAAGCGT
CAGCTGATGT CAGATGTGCC CTACGGCGTA CTGCTCTCCG GCGGACTGGA CTCTTCCGTG
GTATCGGCCA TCACCCAGAC TTTCGCCAAG CGCCGCATCG AAGATGACGG TGCCAGCGAT
GCCTGGTGGC CACAACTACA CTCCTTCGCC GTTGGCCTGA CCGGCGCGCC GGATCTGGCG
GCGGCGCAGA AGGTGGCCGA TGCCATAGGC ACCATACACC ATGAGATCAC CTTCAGCTTC
CAGGAAGGCC TAGATGCGCT TAAGGATGTG ATCTATCACC TGGAAACCTA CGATGTCACC
ACCATACGTG CGGCAACCCC CATGTATCTG ATGGCACGTA AGATCAAGGC GATGGGGATC
AAGATGGTAT TATCTGGCGA AGGCGCCGAC GAGCTGTTTG GCGGCTACCT CTATTTTCAC
AAGGCGCCAA ACGCTCAGGC CTTCCACGAG GAGCTGGTGC GTAAACTAGA TAAGCTGCAC
CTGTTCGACT GCCTGCGCGC CAACAAGGCG ATGGCGGCCT GGGGCTTAGA GGCGCGCGTG
CCCTTCCTCG ACAAGGCCTT TATCGACACG GCGATGCGTA TCAACCCTGA GGCCAAGATG
TCCAAAGATG GCCGTATCGA GAAGCATATC CTGCGTCAGG CCTTCGAGCA CAAGCTGCCG
CAAGAGGTGG CATGGCGTCA GAAGGAGCAG TTTAGCGATG GCGTCGGCTA CTCCTGGATC
GATGGTCTGA AGGAACATGC CGCGGCCCAG GTGGACGATC TGCAACTGGC CAACGCCAAG
TTCAGGTTCC CTTACAACAC GCCGGAAACC AAGGAAGCCT ACTTCTACCG CTGCTTCTTC
GAAGAGCACT TCCCGCTGCC ATCGGCCGCC GAGACAGTGC CAGGTGGCAA GTCGGTCGCC
TGCTCTACCC CCGAGGCGCT GGCCTGGGAT GAAAGCCTGC AAGGGATCAT CGACCCCTCG
GGTCGTGCGG TACAATCGGT GCACGAGAGT GCCTACTAG
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| Protein sequence | MCSIFAILDI QTDATPLRQV ALEMSKLLRH RGPDWSGIYA SDKAILAHER LAIVDIEHGA
QPLLSEDESL ILAVNGEIYN HKELKAELGD KYSYQTNSDC EVILALYQEY GTEFLDKLNG
IFAFVLYDKR SDSYLIGRDH MGIIPLYTGH DAEGNFYVAS EMKALMPVCK TVETFKPGHY
LTKSGETHYY QRDWQSFEAV QDNAASVEEL REALEAAVKR QLMSDVPYGV LLSGGLDSSV
VSAITQTFAK RRIEDDGASD AWWPQLHSFA VGLTGAPDLA AAQKVADAIG TIHHEITFSF
QEGLDALKDV IYHLETYDVT TIRAATPMYL MARKIKAMGI KMVLSGEGAD ELFGGYLYFH
KAPNAQAFHE ELVRKLDKLH LFDCLRANKA MAAWGLEARV PFLDKAFIDT AMRINPEAKM
SKDGRIEKHI LRQAFEHKLP QEVAWRQKEQ FSDGVGYSWI DGLKEHAAAQ VDDLQLANAK
FRFPYNTPET KEAYFYRCFF EEHFPLPSAA ETVPGGKSVA CSTPEALAWD ESLQGIIDPS
GRAVQSVHES AY
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