| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1503 |
|---|
| Symbol | |
|---|
| ID | 4920746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1726005 |
|---|
| End bp | 1726997 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640163058 |
|---|
| Product | oxidoreductase FAD-binding subunit |
|---|
| Protein accession | YP_001093629 |
|---|
| Protein GI | 127512432 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.267976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT TTTACCTCGA CGGTCAGGCA TTTGAGGCCA AGGCCGGTGA GTCGGTATTG
GACACCCTGA TACGCCATGG TCAGCGGGTC AATTACTCCT GTAAGAAGGG GGTGTGCAAA
ACCTGTCTGC TACAACATGT CGATGGCGAG ATGGCGATTG GCGCCCAGCG CGGCCTGACC
CTGGGGCTGA AGCAGCGTCA CTATCTCTGC TCCTGTCAGT GTAAGCCCAC TCCAGCCTTG
CGCCTCAAGT CTATCTTGCC TCAGGACCTC TTCATCGGCG CCAAGATCCA GGAGAAGCAG
TTTATCAATG AGGCCGTGGT GCGCGTTCGC TTGGTTCTTG ATGAACCTCT GGCGCACCAT
CCGGGGCAGT ATATTAATTT ACGGCGCTTC GATGGCTTGA CCCGCAGCTA TTCGCCCACC
AGCCTGCCGG GGGAGCCCTT TTTAGAGCTG CATGTGCGGC GCAAATACAA CGGTCAGTTC
AGTGACTGGC TGTATCACCA CGCGGGGATA GGCGAGAGCC TGCTGGTGCA GGGGCCGCTG
GGCAGTCGCT ATTATCGCAC CGCCTATCGC GATGCCAAGC TGATCATCGT CGCCTTCGGC
AGCGGTCTGG GAGTGGCCCA CGGCATGTTG ATGCAAGCGC TGGCCCAGGG CCATCAGGGG
GAGATCTTCC TTTATGTTGG CGCGCGGGAC GATAACGACC TCTATCTGCA CCCTAAATTA
CTTAAGATGA TGCTGGAGCA TCGCCAGTTT CATTATCAGG CCTGTATCAC GGGGCAGAGT
GAGAGCAAGG GGCGGCGGGT GATCCACGCC AACCCGTTTA GCGAGGCGCT TAAGTGTCAT
CAATTTGACC GTCAGCAGCA CCTGTTTCTC TGTGGCGAAC CTGGCCTGGT TAACGAGAGC
CGGGAGATCG CCTTTCTTAA CGGTTTCCCC ATCGAGCGGA TCCACAGCCT GTCGTTCGAG
TATAAAGATC TGCGTAAACG TCCAAGGGGC TAG
|
|---|
| Protein sequence | MTTFYLDGQA FEAKAGESVL DTLIRHGQRV NYSCKKGVCK TCLLQHVDGE MAIGAQRGLT
LGLKQRHYLC SCQCKPTPAL RLKSILPQDL FIGAKIQEKQ FINEAVVRVR LVLDEPLAHH
PGQYINLRRF DGLTRSYSPT SLPGEPFLEL HVRRKYNGQF SDWLYHHAGI GESLLVQGPL
GSRYYRTAYR DAKLIIVAFG SGLGVAHGML MQALAQGHQG EIFLYVGARD DNDLYLHPKL
LKMMLEHRQF HYQACITGQS ESKGRRVIHA NPFSEALKCH QFDRQQHLFL CGEPGLVNES
REIAFLNGFP IERIHSLSFE YKDLRKRPRG
|
|---|
| |