Gene Shew_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1499 
Symbol 
ID4921875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1721070 
End bp1721420 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content57% 
IMG OID640163054 
Productputative nitrogen regulatory protein P-II 
Protein accessionYP_001093625 
Protein GI127512428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.689557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTA AACTTATCGT CGCCTTCGTC GATGAAACCT GTACCGATAC CGTGCTCGAT 
GCGGCGAGAG AGGCGGGCGC CACGGGAGCG ACAGTCATCA ATCATGCCCG CGGCGAGGGG
CTGGAGAAGA AGAAGACCTT CATGGGCCTG GGCCTGGATA TACAGCGCGA CGTGATCCTC
TGGTTGGTGG AGGAGCACAT GAGTCGCAGC ATTCTGGAAA CCATTTGCCG GGTAGGGGAG
TTCGACACTA ACCCGGGGCA GGGGATTGCC ATACAGATAG ATGTGGAGGA CGCCGTGGGC
GTCGCCCATC AGGTGGAAAA ACTCAGCAAA GAGATTGAGG ATCAACTATG A
 
Protein sequence
MRFKLIVAFV DETCTDTVLD AAREAGATGA TVINHARGEG LEKKKTFMGL GLDIQRDVIL 
WLVEEHMSRS ILETICRVGE FDTNPGQGIA IQIDVEDAVG VAHQVEKLSK EIEDQL