| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1491 |
|---|
| Symbol | |
|---|
| ID | 4921514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1714795 |
|---|
| End bp | 1715622 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640163046 |
|---|
| Product | Ion transport protein |
|---|
| Protein accession | YP_001093617 |
|---|
| Protein GI | 127512420 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGA CCCCGCAAGA GGCGCGTAAA CAGAAGCTCA GAGAGATTAT CTTCGGCACA
GACACTCCGG CCGGTCGCTA TTTCGACCTT AGCCTGATCG TCTGTATCGT GTTGAGTGTC
GCCCTGGTAT TTGTCGACAC CATAGACAGC GTGCATAACC GCTACGGCGA CTGGATCCGC
ATCGCCGAGT GGGGCTTTAC CGGCATATTT ACCCTGGAGT ATCTGCTTAG GCTCTACTGC
TCGGCCCATC CGGTGCAATA CGCCCGCAGC TTCTATGGTG TGGTGGACCT GCTCTCCATT
CTGCCCAGTT ACCTGGCGCT CATCTTCCCG GGCGCTAACT TCACACTGGT GATCCGTGTG
CTGCGACTGT TCCGCATCTT CAGGGTGCTC AAGTTGCTGC GTTATCTCAG CGAGGGCAAC
ATACTGCTGC GGGCCATGAT GCAGTCGAGC CGTAAGGTGT TTCTGTTCTT CTTCTCCGTC
AGCCTGATCG TCATGGTGCT CAGCGCCATC ATGTATGTGG TGGAAGGACC CGAGCATGGT
TTCACCTCCA TGCCGAAATC TATCTACTGG ACAATCGTGA CCATCACCAC TGTAGGTTAT
GGCGATATCA CCCCGCAGAC GACATTAGGG CAGGGGATCG CCGCGCTGAC CATGCTGATC
GGTTACTCCA TCATCGCCAT CCCGACCGGC ATCCTAACCT CGGAGATCTC CCAGGAGATG
GTGCGCAAGA AAGATCTGCG CCGCTGCAGC AACTGTCTCA AGATGGGTCA CGAAGTCTCG
GCGCTCTACT GTGACAAATG CGGCAACGAG CTGGAAACCG ACCTCTAG
|
|---|
| Protein sequence | MDETPQEARK QKLREIIFGT DTPAGRYFDL SLIVCIVLSV ALVFVDTIDS VHNRYGDWIR
IAEWGFTGIF TLEYLLRLYC SAHPVQYARS FYGVVDLLSI LPSYLALIFP GANFTLVIRV
LRLFRIFRVL KLLRYLSEGN ILLRAMMQSS RKVFLFFFSV SLIVMVLSAI MYVVEGPEHG
FTSMPKSIYW TIVTITTVGY GDITPQTTLG QGIAALTMLI GYSIIAIPTG ILTSEISQEM
VRKKDLRRCS NCLKMGHEVS ALYCDKCGNE LETDL
|
|---|
| |