| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1488 |
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| Symbol | |
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| ID | 4923804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1711941 |
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| End bp | 1713326 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163043 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001093614 |
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| Protein GI | 127512417 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGTT TACAACAATC TCAGGTGGAC AGTTTTAAGG CTGGATTTGG TGGCGATGTT
ATTTTGCCCG AAGACAGCAA CTATGACGAA GTGCGACAGA TCTGGAATGC CATGATAGAT
CGAAAACCGG GGATGATCGC CCGTTGCACC TCGGCGGAGG ATGTGGTCAA GGCCGTCAAC
TTTGGCCGGG AACATGATTT ACTCATCTCG GTTCGCGGCG GTGGCCACAA TATCGCGGGT
AAAGCCCTTT GTGACGATGG CCTGCTGATA GATCTGTCCT TGATGAAACA GGTTAAGGTC
GACCCCGACA AACAACTGGC TTTGGTTGAG CCTGGTTGTA CTCTGGAGGA TGTGGACGCG
GCTACCCAAA AACATGGTCT GGCGGTACCC GTGGGGATCA ACTCCACCAC AGGGATCGCA
GGATTAACCT TAGGTGGTGG CTTTGGCTGG TTAAGCCGCA AATTGGGCAT GACAATCGAT
AACCTGGTGT CGGCCAATGT CGTTACCGCC GAAGGCAAAC AGCTCGTTGC CAGTCAGGCC
AGCGAACCAG AGCTCTTCTG GGGACTGCGC GGCGGCGGTG GTAACTTCGG CATAGTCACT
CAATTTGAGT TTAAGCTGCA TCCCCTCGGG CCCGACGTCC TCAGCGGCCT CATCGTTTTC
CCCTTCGAGC AGGCAAAGTC TGTTATCAGT CAGTTTGTTA ACTTTACCGC CAATGCCCCC
GAGGATCTGA GTGTCTGGAT GGTGGCTCGT AAGGCGCCGC CACTGCCATT TCTCCCCGAG
TCGGTTCACG GCAAAGAGGT GATAGTGCTG GCGATCTGTT ATGCTGGCGA TCCCGCCGAA
GGTGAGAAAC TGATCGCGCC GCTTCGTCAA TTTGGCACGC CTGTGGGTGA GCATGTGGGC
GTACAACCCT TTGCTGCCTG GCAGCAGGCC TTCGATCCTT TGTTGACGCC CGGTTCACGT
AACTATTGGA AGTCCCATAA CTTTACCCAG CTTAGTGAAG CGGCTATCGA TACGGCCATC
GAATATGCCG GTACCCTGCC CACAGAGCAG TGTGAGATCT TTATCGCCTC AATCGGTTGC
GCCACCTGTT TGCCGGCCGC CGACGCCATG GCTTATTCGG CCCGGGATGC CCAGTACGTA
TTGAACGTGC ATGTGCGCTG GGAGTCTGCC GACGATGATA AACGCTGCAT CGCTTGGGCG
CGGGAATTCT TCGATAAGAC TAAGCCTTTT GCCAGTGGCG GCGCCTATAT CAACTTCCTG
ACCGATGATG AATCCGATCG TACCGAGTCG GCCTATGGGG AAACCTACGG GCGATTACGT
CAGCTGAAGA AGCAGTACGA TCCGAACAAC CTGTTTAGGG TGAATCAGAA CATCAAGCCC
GCTTAG
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| Protein sequence | MKGLQQSQVD SFKAGFGGDV ILPEDSNYDE VRQIWNAMID RKPGMIARCT SAEDVVKAVN
FGREHDLLIS VRGGGHNIAG KALCDDGLLI DLSLMKQVKV DPDKQLALVE PGCTLEDVDA
ATQKHGLAVP VGINSTTGIA GLTLGGGFGW LSRKLGMTID NLVSANVVTA EGKQLVASQA
SEPELFWGLR GGGGNFGIVT QFEFKLHPLG PDVLSGLIVF PFEQAKSVIS QFVNFTANAP
EDLSVWMVAR KAPPLPFLPE SVHGKEVIVL AICYAGDPAE GEKLIAPLRQ FGTPVGEHVG
VQPFAAWQQA FDPLLTPGSR NYWKSHNFTQ LSEAAIDTAI EYAGTLPTEQ CEIFIASIGC
ATCLPAADAM AYSARDAQYV LNVHVRWESA DDDKRCIAWA REFFDKTKPF ASGGAYINFL
TDDESDRTES AYGETYGRLR QLKKQYDPNN LFRVNQNIKP A
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