Gene Shew_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1487 
Symbol 
ID4923803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1711153 
End bp1711686 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID640163042 
Producthypothetical protein 
Protein accessionYP_001093613 
Protein GI127512416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TCGTTTTGGC ATTTGTGACC GCCTTACTTA TCTTGCTGCT TAGTGCCTGT 
GGCAGCGCCT CACTGGAGGA CTATAGCGCC ACCACCCCAG AGCTGCATCT GGACAGCTTT
TTTGACGGTA AGCTAAAGGC CTACGGCATA GTGCTGGATC GCTCCGGCAC CCTGATAAGG
CGCTTCGAGG TGGATATGTT GGCTAACTGG CTGGGCGATA GGGGCGAGAT CCAGGAGTGG
TTTCTGTTCG ATGACGGCGA GAAGAGCGAG CGCACCTGGC AGCTCACCAA GCTTGATGAT
AATTCCTATC AAGGCAGCGC CCAAGACGTG GTGGGCAAAG CCCTCGGACG CACCCAAGGA
GCAGCGCTGT TCTGGCAATA TGAACTCGAG ATCCCAATCG ATGGCGAGAT CTATCAGGTG
ACCTTAGATG ATTGGATGTT TCTGCTCGAT GATAAGCGCC TGTTCAACAA GACAGAGATG
AGCAAGTTTG GCTTTAAGGT GGGGGAAGTT ATCCTCTACA TCGAAAAAAT TTAG
 
Protein sequence
MKNIVLAFVT ALLILLLSAC GSASLEDYSA TTPELHLDSF FDGKLKAYGI VLDRSGTLIR 
RFEVDMLANW LGDRGEIQEW FLFDDGEKSE RTWQLTKLDD NSYQGSAQDV VGKALGRTQG
AALFWQYELE IPIDGEIYQV TLDDWMFLLD DKRLFNKTEM SKFGFKVGEV ILYIEKI