Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1487 |
Symbol | |
ID | 4923803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1711153 |
End bp | 1711686 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163042 |
Product | hypothetical protein |
Protein accession | YP_001093613 |
Protein GI | 127512416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TCGTTTTGGC ATTTGTGACC GCCTTACTTA TCTTGCTGCT TAGTGCCTGT GGCAGCGCCT CACTGGAGGA CTATAGCGCC ACCACCCCAG AGCTGCATCT GGACAGCTTT TTTGACGGTA AGCTAAAGGC CTACGGCATA GTGCTGGATC GCTCCGGCAC CCTGATAAGG CGCTTCGAGG TGGATATGTT GGCTAACTGG CTGGGCGATA GGGGCGAGAT CCAGGAGTGG TTTCTGTTCG ATGACGGCGA GAAGAGCGAG CGCACCTGGC AGCTCACCAA GCTTGATGAT AATTCCTATC AAGGCAGCGC CCAAGACGTG GTGGGCAAAG CCCTCGGACG CACCCAAGGA GCAGCGCTGT TCTGGCAATA TGAACTCGAG ATCCCAATCG ATGGCGAGAT CTATCAGGTG ACCTTAGATG ATTGGATGTT TCTGCTCGAT GATAAGCGCC TGTTCAACAA GACAGAGATG AGCAAGTTTG GCTTTAAGGT GGGGGAAGTT ATCCTCTACA TCGAAAAAAT TTAG
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Protein sequence | MKNIVLAFVT ALLILLLSAC GSASLEDYSA TTPELHLDSF FDGKLKAYGI VLDRSGTLIR RFEVDMLANW LGDRGEIQEW FLFDDGEKSE RTWQLTKLDD NSYQGSAQDV VGKALGRTQG AALFWQYELE IPIDGEIYQV TLDDWMFLLD DKRLFNKTEM SKFGFKVGEV ILYIEKI
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