Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1484 |
Symbol | |
ID | 4922614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1708852 |
End bp | 1710132 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640163039 |
Product | cyclopropane-fatty-acyl-phospholipid synthase |
Protein accession | YP_001093610 |
Protein GI | 127512413 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGA CAATCAAACA AGTAAATGGT GTAAGGCCTC GCGCTGTGGC AGTGGAACTG GGCACAATGC AGAAGTATCG CGCCCTGGTC ATTCGCCTGT TGGGCCAGCT CAAAGGCGGC TTTATCACCC TCATCGAAGG TGATACGCAG CAGCAGTTTG GTGAGCGAAG TGCAAGCCTC AGCGCCCAGA TAAACGTGTT GGATCCCTGC TTCTATCGCG ACCTTATCCA GGGGGGCAGC ATAGGCGCCG CCGAGGCCTT TCTCGATGGT AAGTGGACCA GCCCGGATCT CACCCGTCTG ATTCAGGTGA TGGCCCGCAA TCAAACCCGG CTGGACGCGC TGGAGCAGAA GATGGCCTGG CTGACCCGCA TCAAGCATCT GCTGCTAAGG CTGAGTCAAC GCAACACTGA GCAGGGCGCC AAGCGCAACA TCCTGGCTCA CTACGACATA GGTAACGAGC TCTACGAGCG CTTCCTCGAT GACTCTATGC TCTACTCCTG CGCGCTTTAC GGCGACAGTG CTCAGACGCT CGCTCAGGCC CAGCAGCATA AGCTGCAAAC CATCTGTGAA AAGCTTGAGC TAAAACCCGG AGAACATGTG CTTGAGATTG GCACAGGCTG GGGGGCGCTG GCCATCTATA TGGCGCAGCA CTATGGTTGC CGCGTGATCA CGACCACCAT ATCCGATGCC CAGTATCAAT ATGCCAAGAC GCGGATTGAG CAGGCGGGCC TTAGCGACCA GATAACCCTG CTCAAGCAGG ACTATCGCCG CCTGACAGGC CAGTATGACA AGCTGGTGTC GATAGAAATG ATTGAGGCGG TGGGCCACGA GTATCTGGGG ACATTTTTTG AGACCTGCTC GGGCTTGCTG AAGGATGATG GCAAGATGCT GCTGCAGGCG ATCACCATCA GTGATGGCCG CTACGAAAAA TACCGTAAAG GCGTCGACTT CATTCAGAAA TATATCTTCC CCGGTGGCTG TCTGCCGTCT GTGGCCGTGA TGAGTGAGCA GCTGGCCAAG CGAACCGACA TGGTGATCTG CGATCTGGAG GATATCGGCC TGCACTATGC CAGAACCTTG TACGACTGGC GTCAGGCGTT CGACCAGGCC TGGCCGGAAC TGGAGGCGCT TGGCTATGAC GAGCAATTTA AGCGTCTCTG GCTGTTTTAC TTCTGCTACT GCGAAGGGGC ATTTAAGGAG CGACTGATCG CCACCCATCA TCTGGTCGCC CGTAAGCCCA GGTATTTTGG TGCTCAGGAT GAAAGCGTTC TGGCTTATTA A
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Protein sequence | MEQTIKQVNG VRPRAVAVEL GTMQKYRALV IRLLGQLKGG FITLIEGDTQ QQFGERSASL SAQINVLDPC FYRDLIQGGS IGAAEAFLDG KWTSPDLTRL IQVMARNQTR LDALEQKMAW LTRIKHLLLR LSQRNTEQGA KRNILAHYDI GNELYERFLD DSMLYSCALY GDSAQTLAQA QQHKLQTICE KLELKPGEHV LEIGTGWGAL AIYMAQHYGC RVITTTISDA QYQYAKTRIE QAGLSDQITL LKQDYRRLTG QYDKLVSIEM IEAVGHEYLG TFFETCSGLL KDDGKMLLQA ITISDGRYEK YRKGVDFIQK YIFPGGCLPS VAVMSEQLAK RTDMVICDLE DIGLHYARTL YDWRQAFDQA WPELEALGYD EQFKRLWLFY FCYCEGAFKE RLIATHHLVA RKPRYFGAQD ESVLAY
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