| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1484 |
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| Symbol | |
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| ID | 4922614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1708852 |
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| End bp | 1710132 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163039 |
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| Product | cyclopropane-fatty-acyl-phospholipid synthase |
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| Protein accession | YP_001093610 |
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| Protein GI | 127512413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA CAATCAAACA AGTAAATGGT GTAAGGCCTC GCGCTGTGGC AGTGGAACTG
GGCACAATGC AGAAGTATCG CGCCCTGGTC ATTCGCCTGT TGGGCCAGCT CAAAGGCGGC
TTTATCACCC TCATCGAAGG TGATACGCAG CAGCAGTTTG GTGAGCGAAG TGCAAGCCTC
AGCGCCCAGA TAAACGTGTT GGATCCCTGC TTCTATCGCG ACCTTATCCA GGGGGGCAGC
ATAGGCGCCG CCGAGGCCTT TCTCGATGGT AAGTGGACCA GCCCGGATCT CACCCGTCTG
ATTCAGGTGA TGGCCCGCAA TCAAACCCGG CTGGACGCGC TGGAGCAGAA GATGGCCTGG
CTGACCCGCA TCAAGCATCT GCTGCTAAGG CTGAGTCAAC GCAACACTGA GCAGGGCGCC
AAGCGCAACA TCCTGGCTCA CTACGACATA GGTAACGAGC TCTACGAGCG CTTCCTCGAT
GACTCTATGC TCTACTCCTG CGCGCTTTAC GGCGACAGTG CTCAGACGCT CGCTCAGGCC
CAGCAGCATA AGCTGCAAAC CATCTGTGAA AAGCTTGAGC TAAAACCCGG AGAACATGTG
CTTGAGATTG GCACAGGCTG GGGGGCGCTG GCCATCTATA TGGCGCAGCA CTATGGTTGC
CGCGTGATCA CGACCACCAT ATCCGATGCC CAGTATCAAT ATGCCAAGAC GCGGATTGAG
CAGGCGGGCC TTAGCGACCA GATAACCCTG CTCAAGCAGG ACTATCGCCG CCTGACAGGC
CAGTATGACA AGCTGGTGTC GATAGAAATG ATTGAGGCGG TGGGCCACGA GTATCTGGGG
ACATTTTTTG AGACCTGCTC GGGCTTGCTG AAGGATGATG GCAAGATGCT GCTGCAGGCG
ATCACCATCA GTGATGGCCG CTACGAAAAA TACCGTAAAG GCGTCGACTT CATTCAGAAA
TATATCTTCC CCGGTGGCTG TCTGCCGTCT GTGGCCGTGA TGAGTGAGCA GCTGGCCAAG
CGAACCGACA TGGTGATCTG CGATCTGGAG GATATCGGCC TGCACTATGC CAGAACCTTG
TACGACTGGC GTCAGGCGTT CGACCAGGCC TGGCCGGAAC TGGAGGCGCT TGGCTATGAC
GAGCAATTTA AGCGTCTCTG GCTGTTTTAC TTCTGCTACT GCGAAGGGGC ATTTAAGGAG
CGACTGATCG CCACCCATCA TCTGGTCGCC CGTAAGCCCA GGTATTTTGG TGCTCAGGAT
GAAAGCGTTC TGGCTTATTA A
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| Protein sequence | MEQTIKQVNG VRPRAVAVEL GTMQKYRALV IRLLGQLKGG FITLIEGDTQ QQFGERSASL
SAQINVLDPC FYRDLIQGGS IGAAEAFLDG KWTSPDLTRL IQVMARNQTR LDALEQKMAW
LTRIKHLLLR LSQRNTEQGA KRNILAHYDI GNELYERFLD DSMLYSCALY GDSAQTLAQA
QQHKLQTICE KLELKPGEHV LEIGTGWGAL AIYMAQHYGC RVITTTISDA QYQYAKTRIE
QAGLSDQITL LKQDYRRLTG QYDKLVSIEM IEAVGHEYLG TFFETCSGLL KDDGKMLLQA
ITISDGRYEK YRKGVDFIQK YIFPGGCLPS VAVMSEQLAK RTDMVICDLE DIGLHYARTL
YDWRQAFDQA WPELEALGYD EQFKRLWLFY FCYCEGAFKE RLIATHHLVA RKPRYFGAQD
ESVLAY
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