| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1478 |
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| Symbol | |
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| ID | 4924102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1703136 |
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| End bp | 1704080 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163033 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093604 |
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| Protein GI | 127512407 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3272] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.913295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AATTGAAGAT CGGCATCAGT GCCTGTGTGA TGGGCGAGCC GGTGCGTTTC
GACAGAGGTC ATAAGAAATC GGGCTTCTGT ATGGAGCAGC TGGCGGAGTT TGCCGAGTTT
AAACCTGTGT GTCCCGAGAT GGCCATCGGC CTGCCGGTGC CGCGCCCGAC CATCAGGCAG
ATAGTGCGGG ACAACATCAT TACCGTGTCC CGCCCCGACG GCAGCGGCGA TGTGACCCAG
GCCCTTAAAG AGTTCGGCGC TAAGGCCGCC CTGAACTATC AGGAGCTGGC GGGTTTCGTG
TTTTGCGCCA AGAGCCCCAG CTGCGGCATG GAGCGGGTCA AGGTGTATCA TCACCACGGT
AAGGGCTCAG AGTCCACCGG CGTCGGCATC TTCGCCGAGC AGGTGATGAA GGCCAATCCG
CTCTTGCCCT GCGAGGAGAA TGGTAGGCTG AACGACCCCA TCATTCGCGA AAACTTCACC
ACCCGCATCT TCACCTATCA GAAGTGGCTG GATCTCAAGG CGGAGGGGCT GACCCGGCAC
AAGTTGATCC AGTTCCATAG CGCCCACAAG TATCTGGTGA TGAGCCACCA TGTCGAGAGC
TATCGCGAGC TTGGACGTCT GTTGGGCCGC GCCGACATTG GCCTCGAGGA GCAGAGTGAG
CGTTATATCT CGGGTCTGAT GCAGGCGCTT AAACATAAGG CGTCCCGTCG CAGTCATACC
AACACACTGC AACATCTGCA GGGCTACTTT AAGCGTCAGC TTGACGAGCA TAAGCGCCGC
GAGCTGACCC AGGAGATCGC CGCCTATCGC GAGGGGCTGT CGCCGCTCCT AGTGCCGCTG
ACCCTGATAA AACATTATCT TATTGAGTTT CCAAATGAAT ACCTGCTACA GCAGGCCTAT
CTGAACCCCC ATCCCAAGGA GCTGAGATTG AGGTACGGCT ATTGA
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| Protein sequence | MKKKLKIGIS ACVMGEPVRF DRGHKKSGFC MEQLAEFAEF KPVCPEMAIG LPVPRPTIRQ
IVRDNIITVS RPDGSGDVTQ ALKEFGAKAA LNYQELAGFV FCAKSPSCGM ERVKVYHHHG
KGSESTGVGI FAEQVMKANP LLPCEENGRL NDPIIRENFT TRIFTYQKWL DLKAEGLTRH
KLIQFHSAHK YLVMSHHVES YRELGRLLGR ADIGLEEQSE RYISGLMQAL KHKASRRSHT
NTLQHLQGYF KRQLDEHKRR ELTQEIAAYR EGLSPLLVPL TLIKHYLIEF PNEYLLQQAY
LNPHPKELRL RYGY
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