Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1471 |
Symbol | |
ID | 4920596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1697292 |
End bp | 1697507 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640163026 |
Product | hypothetical protein |
Protein accession | YP_001093597 |
Protein GI | 162139869 |
COG category | [S] Function unknown |
COG ID | [COG3082] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000313396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.895437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCC AATCTAAATA TTCAAACGCC CAGGTCGAAG CCGTTATCGC CGAGATCCTG GCAGTACTCG ACAAGCACCA GGCGCCGACC GACCTCAGCC TCATGGTGCT GGGCAACTGT GTCACAGATC TGCTGCTACG CAAGGTGCCT GAGGAAGCGC GTGCCCAAGT GGCCGAGCAG TTTGCCAAGG CGCTGACCCA GTCGGTAAAA AGCTAA
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Protein sequence | MAIQSKYSNA QVEAVIAEIL AVLDKHQAPT DLSLMVLGNC VTDLLLRKVP EEARAQVAEQ FAKALTQSVK S
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